HKKJCDRXX_l02_n02_ds2113-1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds2113-1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12884274
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	208645	1.619377234603983	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	37479	0.29088949831399113	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	23665	42.499756	45
GGTCGCC	24400	41.118267	44
GTGGTCG	25590	39.10914	42
TGGTCGC	25835	38.747265	43
CTCGGTG	26115	38.339252	38
ATCTCGG	26765	37.491356	36
TCTCGGT	26845	37.329197	37
GGTGGTC	27005	37.02586	41
TCGGTGG	27570	36.43832	39
CGGTGGT	27775	36.169518	40
GATCTCG	28360	35.327675	35
AGATCTC	30170	33.491634	34
GCACACG	3930	32.861668	18
TAGATCT	31670	31.891146	33
AGTGTAG	31540	31.601711	29
GAGTGTA	32055	31.170843	28
GTAGATC	32415	30.85984	32
GTGTAGA	32800	30.525053	30
TGTAGGG	33455	30.02157	18
CGTGTAG	33780	29.859282	16