HKKJCDRXX_l02_n02_ds2102-1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds2102-1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18307636
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	273052	1.4914650913968357	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	27627	0.1509042456382681	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	30700	42.427063	45
GGTCGCC	31920	40.69281	44
GTGGTCG	34045	38.073353	42
GCACACG	9350	36.88947	18
TGGTCGC	35545	36.454197	43
GGTGGTC	35960	36.00768	41
CTCGGTG	36380	35.69103	38
ATCTCGG	37020	35.243504	36
TCTCGGT	37260	34.9379	37
CGGTGGT	37245	34.82578	40
TCGGTGG	38380	33.895542	39
GATCTCG	38745	33.657158	35
AGCACAC	11520	33.43668	17
CACACGT	6630	32.40906	19
GAGCACA	14775	32.23779	16
AGATCTC	40855	32.205265	34
AGAGCAC	15025	32.000877	15
TAGATCT	42310	31.097841	33
AGTGTAG	42735	30.257244	29
GAGTGTA	43895	29.575296	28