HKKJCDRXX_l02_n02_ds2092-1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds2092-1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14609290
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	547361	3.746663937809435	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	47880	0.32773666618980113	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	61150	43.53194	45
GGTCGCC	63840	41.619972	44
GTGGTCG	66015	40.190636	42
TGGTCGC	67190	39.46449	43
GGTGGTC	67555	39.257385	41
CTCGGTG	67950	39.19143	38
CGGTGGT	67875	39.075615	40
TCTCGGT	68765	38.791443	37
TCGGTGG	69045	38.599213	39
ATCTCGG	69555	38.415676	36
GATCTCG	72355	36.919735	35
AGATCTC	75310	35.742954	34
TAGATCT	77805	34.640266	33
GCACACG	4840	34.260468	18
AGTGTAG	78180	33.91292	29
GAGTGTA	79230	33.559925	28
GTAGATC	79740	33.353977	32
GTGTAGA	80285	33.074314	30
TGTAGAT	80960	32.865257	31
AGAGTGT	81835	32.49713	27