HKKJCDRXX_l02_n02_ds1793-04.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds1793-04.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22817593
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	1104042	4.838555933572835	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	58386	0.255881503364531	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	123085	43.82786	45
GGTCGCC	127320	42.32939	44
GTGGTCG	129800	41.42356	42
TGGTCGC	129835	41.407192	43
CTCGGTG	131920	40.801495	38
GGTGGTC	132540	40.574986	41
TCTCGGT	133265	40.49189	37
TCGGTGG	134315	40.21625	39
CGGTGGT	133820	40.198654	40
ATCTCGG	135080	40.027946	36
GCACACG	14135	38.632233	18
GATCTCG	140215	38.412968	35
AGATCTC	148135	36.567307	34
CACACGT	10900	35.35978	19
AGCACAC	17250	35.125393	17
TAGATCT	155635	34.83124	33
GAGCACA	21375	34.4309	16
AGAGCAC	21660	34.112976	15
ACACGTC	8955	33.718296	20
AGTGTAG	163090	32.884594	29