HKKJCDRXX_l02_n02_ds1793-02.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds1793-02.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26871466
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	1042202	3.8784709401414865	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	75678	0.2816295917759009	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	116775	43.610504	45
GGTCGCC	120460	42.224113	44
GTGGTCG	122805	41.331642	42
TGGTCGC	123125	41.233433	43
CTCGGTG	125105	40.720295	38
TCTCGGT	126250	40.380383	37
GGTGGTC	126165	40.235584	41
ATCTCGG	126850	40.214363	36
CGGTGGT	126835	40.03723	40
TCGGTGG	127700	39.956245	39
GATCTCG	131075	38.871845	35
GCACACG	12790	37.980244	18
AGATCTC	136785	37.564972	34
TAGATCT	142315	36.110172	33
AGTGTAG	145590	34.81908	29
GAGTGTA	147080	34.603954	28
GTAGATC	147445	34.416183	32
GTGTAGA	147805	34.352146	30
CACACGT	9660	34.285553	19
TGTAGAT	149630	33.91512	31