HKKJCDRXX_l02_n02_ds1792-05.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKKJCDRXX_l02_n02_ds1792-05.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18398365
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	1090431	5.926782080907733	Illumina Single End PCR Primer 1 (100% over 51bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	135587	0.736951354101302	No Hit
AGGTCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	19558	0.106302924200058	Illumina Single End PCR Primer 1 (98% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	123700	43.86658	45
GGTCGCC	128485	42.234665	44
GTGGTCG	130115	41.466946	42
TGGTCGC	130585	41.3177	43
GGTGGTC	131875	40.906036	41
CTCGGTG	132455	40.66746	38
CGGTGGT	132745	40.659977	40
TCTCGGT	133345	40.443863	37
TCGGTGG	134075	40.256527	39
ATCTCGG	135460	39.89566	36
GCACACG	13825	39.64472	18
GATCTCG	142450	37.900284	35
CACACGT	9555	36.192608	19
AGATCTC	150730	36.103424	34
GAGCACA	23425	35.98952	16
AGCACAC	17695	35.971153	17
AGAGCAC	24120	35.204464	15
ACACGTC	7340	34.45458	20
TAGATCT	158535	34.30327	33
AGTGTAG	164115	32.646324	29