HKHNTBCXY_l02n02_k-30ar-2.35200000093ed3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKHNTBCXY_l02n02_k-30ar-2.35200000093ed3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7503
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	93	1.2395041983206718	Illumina Single End PCR Primer 1 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGTC	20	6.5941014E-4	45.000004	20
GCACACG	35	1.0108852E-7	45.000004	18
CACACGT	25	3.5316734E-5	45.0	19
AAGAGCA	35	5.4596894E-6	38.57143	14
GAGCACA	35	5.4596894E-6	38.57143	16
AGAGCAC	35	5.4596894E-6	38.57143	15
AGCACAC	35	5.4596894E-6	38.57143	17
GTGGTCG	35	5.4596894E-6	38.57143	42
TCGGTGG	30	1.0354707E-4	37.499996	39
TCTCGGT	30	1.0354707E-4	37.499996	37
CGGTGGT	30	1.0354707E-4	37.499996	40
CTCGGTG	30	1.0354707E-4	37.499996	38
GGTGGTC	30	1.0354707E-4	37.499996	41
GAGTGTA	40	1.3648067E-5	33.750004	28
GTCGCCG	40	1.3648067E-5	33.750004	45
AGATCTC	40	1.3648067E-5	33.750004	34
TGGTCGC	35	2.5638362E-4	32.14286	43
GTGTAGA	35	2.5638362E-4	32.14286	30
AAGAGTG	35	2.5638362E-4	32.14286	26
GATCTCG	35	2.5638362E-4	32.14286	35