Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HKGTTBGXL_n01_AKM356 HKGTTBGXL_n01_AKM356.fastq.gz Conventional base calls Sanger / Illumina 1.9 5865047.0 0.0 76.0 44.0 51.51975997653271 76.0 pass pass pass pass warn fail pass pass warn warn pass HKGTTBGXL_n01_AKM357 HKGTTBGXL_n01_AKM357.fastq.gz Conventional base calls Sanger / Illumina 1.9 13401136.0 0.0 76.0 40.0 73.26539743887446 76.0 pass pass pass pass pass warn pass pass pass pass pass HKGTTBGXL_n01_AKM358 HKGTTBGXL_n01_AKM358.fastq.gz Conventional base calls Sanger / Illumina 1.9 14296046.0 0.0 76.0 40.0 67.83420183766972 76.0 pass pass pass pass pass warn pass pass warn warn pass HKGTTBGXL_n01_AKM359 HKGTTBGXL_n01_AKM359.fastq.gz Conventional base calls Sanger / Illumina 1.9 14940786.0 0.0 76.0 36.0 79.48493121493863 76.0 pass pass pass pass pass warn pass pass pass warn pass HKGTTBGXL_n01_AKM360 HKGTTBGXL_n01_AKM360.fastq.gz Conventional base calls Sanger / Illumina 1.9 16698312.0 0.0 76.0 38.0 74.16459315767729 76.0 pass pass pass pass warn warn pass pass pass pass pass HKGTTBGXL_n01_AKM361 HKGTTBGXL_n01_AKM361.fastq.gz Conventional base calls Sanger / Illumina 1.9 18132337.0 0.0 76.0 38.0 89.2497806959755 76.0 pass pass pass pass warn pass pass pass pass pass pass HKGTTBGXL_n01_JK104 HKGTTBGXL_n01_JK104.fastq.gz Conventional base calls Sanger / Illumina 1.9 18731549.0 0.0 76.0 40.0 52.994313081113255 76.0 pass pass pass pass pass warn pass pass warn fail pass HKGTTBGXL_n01_JK105 HKGTTBGXL_n01_JK105.fastq.gz Conventional base calls Sanger / Illumina 1.9 22738288.0 0.0 76.0 41.0 57.147483752887375 76.0 pass pass pass pass pass warn pass pass warn fail pass HKGTTBGXL_n01_JK106 HKGTTBGXL_n01_JK106.fastq.gz Conventional base calls Sanger / Illumina 1.9 19279438.0 0.0 76.0 40.0 43.17931755844077 76.0 pass pass pass pass pass warn pass pass fail warn pass HKGTTBGXL_n01_JK107 HKGTTBGXL_n01_JK107.fastq.gz Conventional base calls Sanger / Illumina 1.9 9439191.0 0.0 76.0 43.0 38.653544303806115 76.0 pass pass pass pass pass fail pass pass fail warn pass HKGTTBGXL_n01_JK108 HKGTTBGXL_n01_JK108.fastq.gz Conventional base calls Sanger / Illumina 1.9 11068905.0 0.0 76.0 42.0 41.87859463646522 76.0 pass pass pass pass pass warn pass pass fail warn pass HKGTTBGXL_n01_JK109 HKGTTBGXL_n01_JK109.fastq.gz Conventional base calls Sanger / Illumina 1.9 14983328.0 0.0 76.0 39.0 41.71388024581802 76.0 pass pass pass pass pass warn pass pass fail fail pass HKGTTBGXL_n01_JK110 HKGTTBGXL_n01_JK110.fastq.gz Conventional base calls Sanger / Illumina 1.9 18438724.0 0.0 76.0 41.0 40.20385427963334 76.0 pass pass pass pass pass warn pass pass fail warn pass HKGTTBGXL_n01_JK111 HKGTTBGXL_n01_JK111.fastq.gz Conventional base calls Sanger / Illumina 1.9 10397163.0 0.0 76.0 48.0 41.37780427923131 76.0 pass pass pass pass pass fail pass pass fail warn pass HKGTTBGXL_n01_JK112 HKGTTBGXL_n01_JK112.fastq.gz Conventional base calls Sanger / Illumina 1.9 13808318.0 0.0 76.0 46.0 44.23642914655352 76.0 pass pass pass pass pass fail pass pass fail warn pass HKGTTBGXL_n01_JK113 HKGTTBGXL_n01_JK113.fastq.gz Conventional base calls Sanger / Illumina 1.9 23560539.0 0.0 76.0 40.0 59.32297959025765 76.0 pass pass pass pass pass warn pass pass warn warn pass HKGTTBGXL_n01_JK114 HKGTTBGXL_n01_JK114.fastq.gz Conventional base calls Sanger / Illumina 1.9 22386311.0 0.0 76.0 38.0 66.36610692771667 76.0 pass pass pass pass pass warn pass pass warn fail pass HKGTTBGXL_n01_JK115 HKGTTBGXL_n01_JK115.fastq.gz Conventional base calls Sanger / Illumina 1.9 20292999.0 0.0 76.0 41.0 46.5945462089266 76.0 pass pass pass pass pass warn pass pass fail warn pass HKGTTBGXL_n01_JK116 HKGTTBGXL_n01_JK116.fastq.gz Conventional base calls Sanger / Illumina 1.9 23556759.0 0.0 76.0 40.0 66.11950640920347 76.0 pass pass pass pass pass fail pass pass warn fail pass HKGTTBGXL_n01_JK117 HKGTTBGXL_n01_JK117.fastq.gz Conventional base calls Sanger / Illumina 1.9 22575727.0 0.0 76.0 39.0 60.21497770339342 76.0 pass pass pass pass pass pass pass pass warn fail pass HKGTTBGXL_n01_JK118 HKGTTBGXL_n01_JK118.fastq.gz Conventional base calls Sanger / Illumina 1.9 22252213.0 0.0 76.0 38.0 68.3302811197019 76.0 pass pass pass pass pass pass pass pass warn warn pass HKGTTBGXL_n01_JK119 HKGTTBGXL_n01_JK119.fastq.gz Conventional base calls Sanger / Illumina 1.9 23718917.0 0.0 76.0 37.0 86.54786750717955 76.0 pass pass pass pass pass pass pass pass pass warn pass HKGTTBGXL_n01_JK120 HKGTTBGXL_n01_JK120.fastq.gz Conventional base calls Sanger / Illumina 1.9 27171163.0 0.0 76.0 37.0 86.64082148207144 76.0 pass pass pass pass pass pass pass pass pass warn pass HKGTTBGXL_n01_JK121 HKGTTBGXL_n01_JK121.fastq.gz Conventional base calls Sanger / Illumina 1.9 21832177.0 0.0 76.0 36.0 85.34357987752034 76.0 pass pass pass pass pass pass pass pass pass warn pass HKGTTBGXL_n01_undetermined HKGTTBGXL_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 9690810.0 0.0 76.0 40.0 56.541358652312404 76.0 pass pass pass pass pass warn pass pass warn pass pass