HKFJGAFXY_n02_spo0A_T0_rep1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HKFJGAFXY_n02_spo0A_T0_rep1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3261949
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCAGCATTAGAGGTAACAACTAGAGTACAATTTTTTCCAATAGAATCAC	9583	0.29378141718340783	No Hit
GTGGAGACGGTGGGAGTCGAACCCACGTCCAGAAACATCGATTACTTAAG	5034	0.15432491433802306	No Hit
TACGGATTCGACAGGGATGGATCGAGCTTGAGCTGCGAGCCGAGAGGCGA	4302	0.13188434276562877	No Hit
CCCACGTCCAGAAACATCGATTACTTAAGCGTCTACGAGCGTAGCCTGCA	3995	0.12247279157338144	No Hit
TCGAGCTTGAGCTGCGAGCCGAGAGGCGATCTCGTAAACACGCACTTAAA	3884	0.11906991801527247	No Hit
GATGGATCGAGCTTGAGCTGCGAGCCGAGAGGCGATCTCGTAAACACGCA	3340	0.10239277192868436	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTAGAG	1870	46.786366	20
CCAATAG	1865	46.200493	38
CTAGAGT	1880	46.188904	21
CAATAGA	1925	44.590286	39
AACTAGA	2070	41.47445	19
AGAGTAC	2090	41.234344	23
TCGCTTA	1680	41.130646	52
AGAGGTA	2230	40.988533	10
CATTAGA	2250	40.190453	6
TAGAGTA	2155	39.99062	22
TAGAATC	2135	39.747814	42
GAGGTAA	2320	39.116035	11
GTACAAT	2290	38.917336	26
AGGTAAC	2385	38.87417	12
CAACTAG	2275	37.88122	18
ATTAGAG	2400	37.813328	7
GAGTACA	2295	37.404884	24
ACAACTA	2405	37.059834	17
TCCAATA	2375	36.969273	37
TAGAGGT	2470	36.873768	9