FastQCFastQC Report
Mon 1 May 2023
HK7N5DMXY_n02_CIVR_Y4_D7_P2_F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7N5DMXY_n02_CIVR_Y4_D7_P2_F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGAGGCTGCGGCTGGTGCTGGGGCGCAGCGCGCTGCCCAGGCTGTAGG13.125No Hit
GTGCGGATGAGGGACTTGCGGAATCCACACCCTTCCTCAGCGTTCCTGAA13.125No Hit
CTGGAATTGGATATGTAAAAACAGGGTGGTAGGTTGGGTCATGCTTACAA13.125No Hit
GGAACCTTTAATAGAAATTGGACAGCAAGAAAGCGAGCTTAGTGATACTT13.125No Hit
AGCCCACTTAAGTGTAAACCACAGATCATTTACTAAAGAACATGATTCTC13.125No Hit
GCTGTATTGGCGGAGAGACCTGGAACGCGCCTTGTACCTGCTCGTAAGGA13.125No Hit
GCCGGATCACCTCAGCATCCCAGCTGGGATTGGTGAACACCACCTGTTCA13.125No Hit
ATAACCGAATGGTGGCCTAAAAACCATAATTTTCCAATTCCACCAGACAT13.125No Hit
GGGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCG13.125No Hit
CCTTTGTAACCTGTAGGTCCCCGATGTTTAATTTTAGAGCTCCAATTGCT13.125No Hit
ACCTTACCCCAGGCGGCCTTGACGTTGGTCTTGTCGGCAGGAGACAGCAC13.125No Hit
TGGGCTTCAAGAGTCAGCCACGAGGCAGGCACTAGGCCTGGAAATGGCCT13.125No Hit
CTTCATAATATCCCCCAGTTTAGTAGTTGGACTTAGGGAACAAAGGAACC13.125No Hit
CTTACACAAATTTATTCACAAGCAACCACAAACACACACAATGCAGCACC13.125No Hit
GCAGAATCCAGATGCTCAAGGCCCTTCATAATATCCCCCAGTTTAGTAGT13.125No Hit
GTCAGAACCCTCTCAGAGGGCCCAATGATGAAAGGTTTGGAGATCGTTTC13.125No Hit
CTGGGGACTCATATCCATAAATAAACCACAACAAACACAAAAATACAACA13.125No Hit
CAGCACATTAGGTAGCCAGTCCTGACTAGCAGATAGTAGCATTAATTCTA13.125No Hit
AAAGTGGTGGCTGGTGTGGCTAATGCCCTGGCCCACAAGTATCACTAAGC13.125No Hit
CGCAGGGCAGCAGCTCCCGGGCTCTCGTGAAACACTTCAGAAGGAAAAAA13.125No Hit
AGAACTTCAGGCTCCTGGGCAACGTGCTGGTCTGTGTGCTGGCCCATCAC13.125No Hit
CCACTTTCTGATAGGCAGCCTGCACTGGTGGGGTGAATTCTTTGCCAAAG13.125No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13.125No Hit
CTGGGACAGTTAACACCCGGGGTCGGCAGGCTGATGGGTCAGGAGAGACT13.125No Hit
CACCACTCCACCATATCCACACAAAGCAAATGAAATTCCCATGGACAGCA13.125No Hit
GTGTAAACAACCTGGAAGACCTGGCCTAGCAGACAGCAAAGCTCCTCCGC13.125No Hit
GCCCAATCCGCGCTGCTGGACCAAAACACTACAACCCATACTGTGATAGA13.125No Hit
GCTGAAGCCGCGGCCGGCGCGCACCTTCGTGTGGTACCGAACCGTGGGGC13.125No Hit
TTTCATTCTCTTCTGCCTTTAGTGGTATTTCACTTTTAATCCATATTTTG13.125No Hit
GTCGGAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAG13.125No Hit
AAAGTTTATCCTGTTTAGTGTAATAACTTTTACATCACATATAGTGATTC13.125No Hit
GACGTCCACCATCCCAACGGCGTTGCTCAGAGCGTCTGCCAACTTCATGC13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)