FastQCFastQC Report
Mon 1 May 2023
HK7N5DMXY_n02_CIVR_Y4_D7_P2_B6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7N5DMXY_n02_CIVR_Y4_D7_P2_B6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCTCCCCGAGGCCTGGCTTATGGTGGTGGCCAGGGCCCTCGTCACCCT17.142857142857142No Hit
GGCGGCCAGGGTCACCAGCAGGCAGTGGCTTAGGAGCTTGAAGTTGACCG17.142857142857142No Hit
GCCCAGCTCCCCGCCGAGTTCACCCCTGCGGTGCACGCCTCCCTGGACAA17.142857142857142No Hit
TTAGTCTACAAGTGAGTTGCTTGCTTATCAACCGTAGGAGTGGTCTGCGC17.142857142857142No Hit
CAGATACACATTCCAGTTTGTATTCTTAGGAATGATTCTTAGGCAGTGCG17.142857142857142No Hit
GGGGGGTCTGCCATCTGTATTTCCCTTATAATAATAAATGAATACATTTA17.142857142857142No Hit
CGCCCACTCAGACTTTATTCAAAGACCAGGAAGGGCCGGTGCAAGGAGGG17.142857142857142No Hit
CCTGGGCAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGT17.142857142857142No Hit
GGCGAATGCTATGAAGCCCAGGCAGCAGGTGTTCATGAAGAGGGTGTTGA17.142857142857142No Hit
CTGGGTCCACCCGAAGCTTGTGCGCGTGCAGGTCGCTCAGGGCGGACAGC17.142857142857142No Hit
GCCCCAGCCTGCTGGTGACCCTGGCCGCCCACCTCCCCGCCGAGTTCACC17.142857142857142No Hit
CTAAGCTCGCTTTCTTGCTGTCCAATTTCTATTAAAGGTTCCTTTGTTCC17.142857142857142No Hit
CGCGTGCAGGTCGCTCAGGGCGGACAGCGCGTTGGGCATGTCGTCCACGT17.142857142857142No Hit
TTTGCTTACAGCACAAATCATGTTGTCAGTGTGAGGTCCAAGAACAGATG17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)