FastQCFastQC Report
Mon 1 May 2023
HK7N5DMXY_n02_CIVR_Y4_D7_P2_B1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7N5DMXY_n02_CIVR_Y4_D7_P2_B1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCGTTT15.0No Hit
AAAGCTGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAA15.0No Hit
TCCTCATCCAGTTAAACCAAAACCAAATGTCAAAGCACATTGAACATAAC15.0No Hit
CAGCACCGGGCTGGACTGCCCTGATCCCTGGGACGTGAGACTTAGCTTCC15.0No Hit
CAAGAAGCATGGCCACCGAGGCTCCAGCTTAACGGTATTTGGAGGTCAGC15.0No Hit
GGGTGACCTTGGATTCTGGCCACAGTGACTTAGCGGTCCGACTCCGGTGG15.0No Hit
GGCGCACACCCTCGCCAGTATCCTGCGGAGGCCCACCACACGAAGAAACA15.0No Hit
CAAGAAAGTGCTCGGTGCCTTTAGTGATGGCCTGGCTCACCTGGACAACC15.0No Hit
GGCATATTCCCACTGGGCAGTGACGGGGGAAGCTTGGGACCCGCTATCCG15.0No Hit
TCCAAGTCCAGTGCACCCAAGACAGCCTGATCCACTTAGAACTGTGCCCA15.0No Hit
AATTAGCCAAATACAACAAAGGATTTAAACCACTACTTTGTGATTGTTTT15.0No Hit
TTCTTAATACTTCTCATCCTCCAAAATCTGTTAAAATCATCATCTTCCAC15.0No Hit
CCACGTTAATTCACTATGTGGAGGTGAAAGGGTCTGAGCTTGGCATTCAC15.0No Hit
GTTGAACGCAGACGTTCAAGGTCTCCAAGGAGATCTCTGAGTCCACGGAG15.0No Hit
ATCATATCCTTAATTAAAAAATAAAATCCAATAAAAATGATTTATACATC15.0No Hit
GGGTTGCCCATAACAGCATCAGGAGTGGACAGATCCCCAAAGGACTCAAA15.0No Hit
CCTGGACTGAGATTTCTTCCTCTTTGCTGGTGGGGGGCGGCTGGAACTGA15.0No Hit
GGACATTCAGACTGAGCGTGCCTACCAAAAGCAGCCGACCATCTTTCAAA15.0No Hit
GTAAAATGCCTGTTCCTTCACGATTGAATTCTGAAACATTTAGATAACAA15.0No Hit
GTGAGTTATTTCCTAGCACTTGTAAGCACATATCCTTACCAAGAGGAACC15.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)