FastQCFastQC Report
Mon 1 May 2023
HK7N5DMXY_n01_CIVR_Y4_D7_P2_F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7N5DMXY_n01_CIVR_Y4_D7_P2_F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTCCAACGCAAATGGAAATCTGTGGTTACACAGCATCCTCAGGAGCT13.125No Hit
AAAAGACTCGTGAGAAGGTGAAAAGTAGTGATGAGGCAGTGATCCTGTGT13.125No Hit
CGACGCTCCAGCGCCATCCATTTTCAGGGCTAGTTGATTCGGCAGGTGAG13.125No Hit
AGCCAGGCTAATTTTTTGTATTTTAGTAGATACGGGGTTTCACCATGTTA13.125No Hit
AAAAACAATCACATCTCTTGAAACACACAATCCAAACCATAGTACAAAAA13.125No Hit
CTTGAAGCCCCACTTCCACAAGGACTGGCAGCGGCGCGTGGCCACGTGGT13.125No Hit
CTCAAGGGCAACTTTGACACACTGAGTCTGCTCCAAAGTTAAAAGCTGCA13.125No Hit
CTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTC13.125No Hit
GTGCTGGTCTGTGTGCTGGCCCATCACTTTGGCAAAGAATTCACCCCACC13.125No Hit
AATGCCCTGGCCCACAAGTATCACTAAGCTCGCTTTCTTGCTGTCCAATT13.125No Hit
GGGGGACAGGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCCT13.125No Hit
GTGGATTCAAAATATGGATTAAAAGTGAAATACCACTAAAGGCAGAAGAG13.125No Hit
CAGTAGCTTATTTGAACTTGAGACCATTGTAAGCATGACCCAACCTACCA13.125No Hit
GTTTAATGGTACTTACTGAGCTATAGCATAGCTGCTTAGTTGTTTTTGAG13.125No Hit
AAGTTTCATGCCAAGACCAGCCCCCTTCTGACAAGTCTCATTGAGAGTGT13.125No Hit
CCTCAGTGCAGGCTCCCTGTCGGAGAGTGCAGTTGGGCCCGTGGAGGCAT13.125No Hit
GTCGGCCACCTTCTTGCCGTGGCCCTTAACCTGGGCAGAGCCGTGGCTCA13.125No Hit
GCTGGAGCTCTCACTGCAGATATAGGCGACCTCCACCTCTTGGCTGGAAA13.125No Hit
CGATAACTTCTGGTACTGTACTCATGCCAACAGCGTCTGCTCCCAGCTTC13.125No Hit
TGCAGATATATAAAATAAAAGGATATCCTGGGGCCTCAAAATGTAGAACA13.125No Hit
CTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGCCCACCTCC13.125No Hit
AAGAAAGCGAGCTTAGTGATACTTGTGGGCCAGGGCATTAGCCACACCAG13.125No Hit
CTGCCCTGGGTGAGCTCCCCATCCTGCATCTGCTGCAGCCCACAGCTCAG13.125No Hit
GAAAAAACAACCACGGCAAAGTTCATCTCGAAATCAGGAAAGAAAGCAGC13.125No Hit
TTTTTTGCAATGAAAATAAATGTTTTTTATTAGGCAGAATCCAGATGCTC13.125No Hit
CACCAGCCACCACTTTCTGATAGGCAGCCTGCACTGGTGGGGTGAATTCT13.125No Hit
GGCGGCCAGGGTCACCAGCAGGCAGTGGCGTAGGAGCTTGAAGTTGACCG13.125No Hit
CTCACACACACCATCACAAAAGCCAACTAGCAAATACTATCCATCAGCAT13.125No Hit
CTCCTCACTTGCACGGCTTTGATTGAGTGTTAGGTGTCTCTTTGTCTGCC13.125No Hit
CCCTGCTCCACGTCTGCGCCGCCGCCGGAGTCCACTCCCAGTGCGTGCAA13.125No Hit
CCAGCAGCCTCAACAGGCACAGCTCCTCCCTCACAGTGGCCCAGTTAGGC13.125No Hit
GTCCGCGCCACCGCCGCCGCCCAGGCCATCGCCACCCTCCGCAGCCATGT13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)