FastQCFastQC Report
Mon 1 May 2023
HK7N5DMXY_n01_CIVR_Y4_D7_P2_B6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7N5DMXY_n01_CIVR_Y4_D7_P2_B6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAGACCTACTTCCCGCACTTCGACCTGAGCCACGGCTCTGCCCAGGTT17.142857142857142No Hit
GCCGGTGCAAGGAGGGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGA17.142857142857142No Hit
AAAATATATACAAAAAAGACAATCAAAACATAACTTAAAAACTATTCAGG17.142857142857142No Hit
GCTGGGGGGAGGCCCAAGGGGCAAGAAGCATGGCCACCGAGGCTCCAGCT17.142857142857142No Hit
CAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAA17.142857142857142No Hit
CGCACTTCGACCTGAGCCACGGCTCTGCCCAGGTTAAGGGCCACGGCAAG17.142857142857142No Hit
AAGCCACTGCCTGCTGGTGACCCTGGCCGCCCACCTCCCCGCCGAGTTCA17.142857142857142No Hit
TTTGCAATGAAAATAAATGTTTTTTATTAGGCAGAATCCAGATGCTCAAG17.142857142857142No Hit
CAGTAACTGTCCTAGTCTCTCTCATCCACTCTCCAAGCTCTTCTGCACAT17.142857142857142No Hit
TACCATCAGCTTTACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACA17.142857142857142No Hit
CGGCGGCCAGCCTCCCAACTACGAGATGCTCAAGGAGGAGCAGGAAGTGG17.142857142857142No Hit
GGGCATTAGCCACACCAGCCACCACTTTCTGATAGGCAGCCTGCACTGGT17.142857142857142No Hit
AGACAAGCAGCTGAGCTTCGAGGAGTTCATCATGCTGATGGCGAGGCTAA17.142857142857142No Hit
ATGCAAAACTGAATCAACTGAGGAGGGAAGGCATTCGCTATGCCAGGATT17.142857142857142No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)