FastQCFastQC Report
Mon 1 May 2023
HK7N5DMXY_n01_CIVR_Y4_D7_P2_B1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7N5DMXY_n01_CIVR_Y4_D7_P2_B1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAGT15.0No Hit
GTGGGTGTATAGGTGTGTGTGGGTGTGTGTGTGTATTTTTCCCCATGAGT15.0No Hit
GTGAACATGTGAGAATCTTGCTCTACTAATTGATAGGAAGGAGACTAGAA15.0No Hit
GTATATTTTTTAAAAACACATCTTAACTCCACGCTTTACGATATTATAAA15.0No Hit
CAAATTTGAGGATATGTACAAAAAATTTTAAACGACAACTAGGAGTATTC15.0No Hit
CTCACACAAGCCAGGAACTTGTCCAGGGAGGCGTGCACCGCAGGGGAAAA15.0No Hit
GAAAAATGTAATGTAGCTTTTTCCACAAGCCACTTCCCTGTCCCTTCAGT15.0No Hit
TAAATTACAGTCCTCCAAGAAAGTTGCTTTCCTCAGGCAGAATGCCCCTC15.0No Hit
GCGAGCTTAGTGATACTTGTGGGCCAGGGCATTAGCCACACCAGCCACCA15.0No Hit
CAGCACTTCTACCTTAAAAACTTATCAAAACAGATTATCCACCACACAAA15.0No Hit
CTACAACATCTACACCCACATACAAAAAGACATTAAATCTAAAGAAAACA15.0No Hit
AGAGGATCCGCCCTCGAATGGACACATTACCAGTGAAGGGGCATTTCTTG15.0No Hit
TTCTAAGGAGGTTTCTAATTTTGTAATTGTTAAAAATAGAGTTAATTTTG15.0No Hit
GCGGTAGCCGCCTCCCGGAGCCCGACGTGCGCGCGCAGCGCCTCGTAGGC15.0No Hit
GTCAACTTCAAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGCCCA15.0No Hit
GCTTGAGCCCAGGAGTTTGATTTGGCAAGACCTGGTCTCTGATTTTTTTA15.0No Hit
TGTGGGCTGCCAGGCCTCCCTCATACCCCTGGAGCAGTCCTCCAGAGCCA15.0No Hit
CTCCCTTTCTATGGCTTCACGCTCTAGTCGCTGGCGTTCTTTATCTCTTT15.0No Hit
CGAGGATATTTGGGCTGTCTCCGGAGTCGCAGTGTCTTCGGCCGCCGGAA15.0No Hit
GCAGCCTGCACTGGTGGGGTGAATTCTTTGCCAAAGTGATGGGCCAGCAC15.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)