FastQCFastQC Report
Thu 10 Dec 2020
HK7MWAFX2_n02_1987_d06_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7MWAFX2_n02_1987_d06_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGCGGGGCGGGG12.857142857142857No Hit
CGGGGGGGCGCGGTGACGGTGGCCGGGGGGGGGGGGTGGGGGGGGGGGGG12.857142857142857No Hit
GGGCCAGAAGGCAGAAGGCCTCCTGAGGGCTGCTCTCTGGCTTCTGGGCT12.857142857142857No Hit
TCGCACCGTACTTAAGGGTCCAATCTGATAAAATGACGGATCAAAGGATT12.857142857142857No Hit
GCGACATGGGGCTCTGTCCTGGCTGGAGAGGTCCCTCATCCTCCCACAGA12.857142857142857No Hit
GAATAGGACACAGTCACTCGGCCCAACACTGGCCAGAGCTCCCATGAGTG12.857142857142857No Hit
GAATAGGTTACATGTAAATGAGGGGGAAGAAAAGGAGGTTGTATTTTAGA12.857142857142857No Hit
GGCCTAAGTTTCATATTTTCTCTATGTGCTCTCTACCTCTGTCATTACAT12.857142857142857No Hit
AAATATCTGCGTTTGCACATTGTTATACGACATGGCCATCAGCTCATTTA12.857142857142857No Hit
AGGTGGCCCACCAAGGGAACACGCTGGTGAGGCAGACTCCGGCCCCTTCA12.857142857142857No Hit
TAACAACGGAAACCTCAGCCTAATAAAACACGTTACTTAGATTGACTTGA12.857142857142857No Hit
CAGCGCCACCTGGACAACCACGGACGTGTCCGCTGCTTCTGAAACGGGGC12.857142857142857No Hit
AGCGGGGCGGCGGGGGGGGTGGTCTGGGCGGGGGGGGGGGGGGGGGGGGG12.857142857142857No Hit
AGCGAGTGAAGTAACGATCCACGAGCGACGGCACAGTACCTTCCGCGGCC12.857142857142857No Hit
GAGGAGGTAGAGGTGAAGCCTAGGATTGACCAGTCCCACCTCAGCGTACC12.857142857142857No Hit
CTTGAGAAGCGTCGATCAGAACCACATACTAGACACAAGTTGATAAAAAA12.857142857142857No Hit
GCTCCAGGGCAAAGGGGCACAAAGAGAGGGACAATAGGTACTGAGCTCTT12.857142857142857No Hit
CTCTATGTGCTCCCAGGTTTTGCACACACAGAGGCATCTCTGCTGGGATC12.857142857142857No Hit
GGAAGTCAGCAAACCCCATAGCAAGCACAAAAGATCAGGAGACAGTAGAA12.857142857142857No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12.857142857142857No Hit
ATTTAAAACAGTGTAGCAGTTCCTCAAAACATTAAACATAGAATTACAAC12.857142857142857No Hit
GAGCAGGGGTAGCAGTGGGGGGCCCGAGGGTGCGGGACGGGGGTACGGGG12.857142857142857No Hit
GGGCACACGTGGGCTTGCCACCAAGCACCCGGCCCTGAACTCGCAGAAAC12.857142857142857No Hit
GGTCGCAGACCCTGGAGCGGAAGGGTCGGTGTCACTTACTTCACAGTCAT12.857142857142857No Hit
GGGGAACCCCATGCAAGACGAGGCAAGCCTACAGGGCAGGCGGAGGCCAG12.857142857142857No Hit
GTTAATGCTGGTGGTGGCACATAGTACATTAGTCAGGGTTCTCCCGAAAA12.857142857142857No Hit
GCCAAAGACAGATGCTCAGCCAACTGAGCCACCCAGCCACCCCAAGATTG12.857142857142857No Hit
GTATAATGATAGGGCTGATCGCCTAGGGTGTTGCCAGGATTCAAGGAGCG12.857142857142857No Hit
GTACTATTATTGTTCCCATTTTACAGTTGAGAAAGCCAAGGCTCTGAGAA12.857142857142857No Hit
CAACAAGGTTATGGGGGGCCACCATGTCCCCTAAGCACTGTATGTGATTA12.857142857142857No Hit
ACCTGGTGGGGGGGGGTTGGAAGAAAGAACCGTATCCTGAAATACAAATT12.857142857142857No Hit
GAGATGGCATTGTGCGCAGAGTGCCATCCTAGGCCACGCCCGCTGCTGCC12.857142857142857No Hit
GTACAGACATGTATGAGGGATCGTTGTTGGGATTTTTGGCCGATTGCCGG12.857142857142857No Hit
GTTGTAGTACAGGCGAATTAAGCCAAGGTTGCCCAAACCCTAGAAGAAGA12.857142857142857No Hit
CAACAGGCTGACAGATTGATCACCACCTTGGTGGTGTTTAGTCACTCAAT12.857142857142857No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)