FastQCFastQC Report
Thu 10 Dec 2020
HK7MWAFX2_n02_1987_d02_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7MWAFX2_n02_1987_d02_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTATTTTAGTGCATGTGTGAGGAAGGAGTAGAACAAAGAAGCAATAAGC17.142857142857142No Hit
CGGTTTATCAGACCGCTTCGGCGTTCTGATTTTATCTGTCTCGGGCTGAA17.142857142857142No Hit
GTCTACATCCTGAATTATTGCACTATTCTGTCTCTACAAACGAAGGTATT17.142857142857142No Hit
CTCGATGGCACCGGAACTGACAACCAATGTTAATGAGCAAAATAAGCAGG17.142857142857142No Hit
CCTTTGCATATCAATGGTTTCAGGGAACATCTCTCTCATTTCTGATGATG17.142857142857142No Hit
ATCAAATGCTTTTTCTGCATCTGTTGACATGGTCCTATGATGTTGATCCT17.142857142857142No Hit
AGGGAGAGTAGCCAGCCCACCAGCCTTCCAGGCCTGTGGTAGGATCCCCA17.142857142857142No Hit
TACATACGGATTCTGAAAAACTCCAGTCCTTAGGAATATAAAAATGCTTA17.142857142857142No Hit
TATGGTAGAAGCGCTATCAAATGCTTTTTCTGCATCTGTTGAGATGGTCC17.142857142857142No Hit
ATTAGTAACTAGGCTAGGTAGCCATTATCAATTCTATCAACTTCCCAGTT17.142857142857142No Hit
GGAGAAGTGGGAGGAGCCAGTAGAGGGATGACCTCATGGTCCAGGTGACA17.142857142857142No Hit
GGGGGTGAGGGCGGGGGCCGCGGGGGGCGGGGCGCGTGCGGGGGGGGGGG17.142857142857142No Hit
GGTTTAGAGCCTCTGCCTTTGGCTCAGGTCATGATCCCAGGGTCCTGGGA17.142857142857142No Hit
ACCCAGCGCGGTCGGGGCAGTCGACAGCTGGTGTTGAGGTTGCGCGGTTT17.142857142857142No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)