FastQCFastQC Report
Thu 10 Dec 2020
HK7MWAFX2_n02_1974_d04_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7MWAFX2_n02_1974_d04_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTTCATCTAGGTTTTCTACATTCCCATTGTAACACGTTCAATTTACAG112.5No Hit
GTGTGTATACACACACACACACACACACTTTCTCTACACACACACATACA112.5No Hit
AAAAAAAAACCAAAAACCCCCTCAATAAATTAACTTAAATTAAACCCTGA112.5No Hit
GTTGTAATGCTCTTCATTGGCTCTTGTTACAGTGTTTGGATTTTTTTCTT112.5No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG112.5No Hit
GGTAAGTACTGTTTGCGCGTCTTTCCAGCCAGCACCCGTATCTCCGGGTC112.5No Hit
CTCTGGCACTTGTCAACAGGTCACCCCATGTCCAGGCTCCCAAGGGCAAC112.5No Hit
CCTGAGGCATTGTCACATCCTGTAGGGGTTTCTAGATCATCAAGTGAGGA112.5No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)