HK7MWAFX2_n02_1967-d08-rep2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HK7MWAFX2_n02_1967-d08-rep2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	542447
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACTGTGCTGCTTCTGAGAAACCAGCAGGGCCTGTTAATTCTTT	1182	0.21790147240191207	No Hit
CTTATAAGGGGTCGAGTATTCATTACCACAATTCAACAACAAAAAGACAA	894	0.16480872785728373	No Hit
CTTTTATAATATGCAATGTGAGGTCATCGCTGTTCACTAGAAAGTGGAGA	751	0.1384467053924162	No Hit
GTGTAAGAGAGTGTGTCTAGTTTCATTCTTCTATATATAGTCACCCAATT	703	0.12959791463497816	No Hit
GTATTTACATGTGTAATCACCTTCCAGATCATGATATAGAATACTTAAGT	675	0.12443612002647263	No Hit
GCATTATCCAGCTCCAGAATTTTAGCCACGACTCCCTGTTTCAGGTGACT	666	0.12277697175945299	No Hit
TCCCTATACTGTCTCTTTCTGGATGTTCAGACACAGTGATCTATCTGAGG	656	0.12093347368498675	No Hit
CTATTGGTGCTTCTTACATTCAGCAAGTGAAAGATGCAAATCCTAACCAT	610	0.11245338254244194	No Hit
GAGTAGCATTATCCAGCTCCAGAATTTTAGCCACGACTCCCTGTTTCAGG	558	0.10286719255521738	No Hit
GGTCTACATCTCCTCCAGGCTATATCTTCTACGGGATCTCAGACAAGGAC	549	0.10120804428819774	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTACC	10	0.007090177	144.99861	145
GACGCGC	30	0.0019353363	72.499306	145
TAGTTAC	40	0.0060430113	54.389523	3
GGGTCGA	370	0.0	52.9049	9
CCCTATA	290	0.0	50.013355	2
GGCGTAA	45	0.009619602	48.35516	1
ATACTGA	250	0.0	43.499584	6
TATACTG	1015	0.0	42.860683	5
TGATCCG	85	5.3385484E-5	42.646652	9
CCTATAC	545	0.0	42.580177	3
TACACCG	175	5.2750693E-11	41.431995	5
CACCATA	305	0.0	40.40945	7
TACTGAG	345	0.0	39.927155	7
GGGGTCG	500	0.0	39.149628	8
GGTAGTA	130	3.6944766E-7	39.038086	8
CCGGGCG	75	0.0014828567	38.666298	145
AGGGGTC	510	0.0	38.38199	7
TAAGACT	95	1.0266529E-4	38.168087	4
CTTATAA	535	0.0	37.96106	1
TATAAGG	535	0.0	37.95406	3