FastQCFastQC Report
Thu 10 Dec 2020
HK7MWAFX2_n02_1910_rep2_d12_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7MWAFX2_n02_1910_rep2_d12_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1662
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATGAACAAACCTAAGAGAAGCAATCAGCACCAATACCATAGGGAACT20.12033694344163659No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12033694344163659No Hit
GCATTTGACATATAGAAAAGCACTTAGGGAAAATCATTGTGTGACTAACT20.12033694344163659No Hit
TCCACATCCATGCTGATGGCCAGACTTAGTCACACAGCCACACCTAGCTA20.12033694344163659No Hit
GGTGAAACCATGGGGTCCTGGACTTTTGCTTGTTGGAAGTTTTTGATTTC20.12033694344163659No Hit
CCATTACTCCCTGTCAAAGCCCTTTGTATCCTTCTTAACACTTTTGTTAC20.12033694344163659No Hit
CTATACCACTGTGGTTGGAAAAGATGGTTGATTTGATTTCAGTCCTCATT20.12033694344163659No Hit
GCTGTGATGTGCAAGTGTTTTCTCTCGAGTGAATAAACATTGAGTGACTA20.12033694344163659No Hit
ATCTTCTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTCAAAAAATCACTGA20.12033694344163659No Hit
GTTAGAGGCCCTGTCTTGGCACAAGAGTTGGCCAGGATGGGCTCCAGGGG20.12033694344163659No Hit
CTTTAATACCTCACACTTCTCTCAATGATCCCCCATCCAGACAGAAGATC20.12033694344163659No Hit
TCACTATTCCCATGTCATGGGGTCGGTGAGCATGACCCAGGACTAACACA20.12033694344163659No Hit
GGAAAATTCTAGGCTTCTGGAATTTATTGACTTGTCTTGTGGCCTTACAT20.12033694344163659No Hit
ATCTTCCAGAGCATGTCAGCTTAATCATCCCTCCATTTTCCCGAGGCTGA20.12033694344163659No Hit
AACACATTGTCACACTCACCAGTCTAAGTGCGGTGGCAGCAGAGGCTCCA20.12033694344163659No Hit
CCACAGAACTGGGGGCACAGTCTGAAAACAACTGAATTGTGGGATCTCTA20.12033694344163659No Hit
ACCCAGGTGCCCTCTTGTGACCATTTTTAAATCGCCTTCAATAAATATGA20.12033694344163659No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)