FastQCFastQC Report
Thu 10 Dec 2020
HK7MWAFX2_n01_1987_d12_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7MWAFX2_n01_1987_d12_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1022
Sequences flagged as poor quality0
Sequence length151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGTATACCATTTTTAGTAGTTTGTATCTTTAGATTTTTCTCGCTCTGT20.19569471624266144No Hit
CCCACAGTGCTAGGAACAGCGCCCAAGGTCAGGAAGGAGGACAGTCCCGT20.19569471624266144No Hit
GGTAGAAATATTAGATTGGCAGCATGGGATCCGAAGGGGCACATGCACCC20.19569471624266144No Hit
GAAGAAAGGTAGATAAAATAATTGACACTTGGCTAAAGTGAAATTTTGAA20.19569471624266144No Hit
GGGTATCTGTTCTTACCACAGTCTGAGGGAGTATAAAACGCATATTTACG20.19569471624266144No Hit
CTCTAGATGTAACTAACACTAGGGGTTTCTGTGAGGTCAAGGGAGACTAG20.19569471624266144No Hit
TTATAATACAGCCCTGATAATGACAGCTGACCATTTTCGGGTTCATGTAC20.19569471624266144No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)