HK7MWAFX2_n01_1980-d02-rep2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HK7MWAFX2_n01_1980-d02-rep2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	555765
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGTGGGTGGGTGATGTATGCCCCACACGAAAAGAATGCTCTTTCC	1616	0.29077037956690327	No Hit
GTTTTAGTACCGACCAATAATAATCAATTCTTCCCTGCAGACCATTGACA	927	0.1667971174867075	No Hit
CACCTATACCGAGCAAACAAATTTGTACATAAGAAACGACACAACAACAA	885	0.15923996653261718	No Hit
GTCCTACATCGTCGAAAGATCATCAGCTGTAAATGGAACGTGTTACCCTG	868	0.15618111971786636	No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAG	793	0.14268620729984796	No Hit
ATATTATTCACCTTGGATGTTATTTTATCAATTGCCTTTTGAGTTGAATC	733	0.13189027736543324	No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAGTGCATGTGTG	673	0.1210943474310185	No Hit
GCTTCAATCCAATGATTGTCGAGCTTGCGGAAAAGACAATGAAGGAATAT	655	0.11785556845069409	No Hit
CTATACTACTAGTAGTAACAGCAAGCAATGCAGATAAAATCTGCATCGGC	626	0.1126375356490603	No Hit
GTACTAAAACCAGGCCAAACATTGCGAGTACGATCCAATGGGAATCTAAT	607	0.10921882450316231	No Hit
CACTTAGAAGTCTGCTTCATGTATTCAGACTTCCATTTCATTGACGAACG	606	0.10903889233758873	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTACGT	40	6.110622E-7	90.6331	1
GGTACTG	195	0.0	59.48714	5
AGGTACT	265	0.0	49.24525	4
TTGATCG	45	0.0096369255	48.3333	145
TTACGTG	80	3.7325117E-5	45.312473	2
TACGTGT	80	3.7325117E-5	45.312473	3
CAGGTAC	280	0.0	44.01783	3
TATACTA	250	0.0	43.499973	2
GCGAAAG	120	1.971348E-7	42.29164	2
GTACTGA	275	0.0	42.18179	6
GACAGTA	325	0.0	40.15382	7
GTATAGG	855	0.0	39.009335	1
GCAGGTA	345	0.0	37.82606	2
TAACTAT	215	1.2732926E-11	37.096336	1
TTATATC	100	1.3906593E-4	36.249977	4
TACCTAT	100	1.3906593E-4	36.249977	7
CTACTAG	310	0.0	35.08062	6
CTAGTAG	300	0.0	33.833313	9
ACCGTGT	215	4.8567017E-10	33.72091	8
AGCACCG	195	6.9812813E-9	33.461517	5