FastQCFastQC Report
Thu 10 Dec 2020
HK7MWAFX2_n01_1975_d08_rep2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7MWAFX2_n01_1975_d08_rep2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGCTGCCAGCATACCTTTTCACGACTCCATAGTCACCTTCGCGCGTGA14.761904761904762No Hit
GGGGGGGGGGGGGGGGGCCCGCCATTTCTTCTTTATCTCCTCTGTGGCAG14.761904761904762No Hit
GTTGGGAGGTTGGGGTTCTGGGTGTGGGACGAGGAGTGGGGTAAGAGGCA14.761904761904762No Hit
ATCCAACACAATCATAAACCCACTCCAACAAAAACCAAACCTGATTAATA14.761904761904762No Hit
CACGTGGGCTTGCCACCAAGCACCCGGCCCTGAACTCGCAGAAACCCCTC14.761904761904762No Hit
TGGCCTCGGTGTCCAGTGGCCTCAGAGCCCGTCAGAGCTGCACCCGCGTG14.761904761904762No Hit
GTAATCCGCAGGAAAGTGGGGAGTAAAGGTCCGCAGGTAAGCGGGGACAT14.761904761904762No Hit
GTTTACCTCCTTGCCTCCCACTGGACTCTAAACTATCACAAGGACAGAAA14.761904761904762No Hit
GAACAGCACGGGTGGGCGTCTTCGAATTTGGCGTTGCCCCAGGCGACCTG14.761904761904762No Hit
GTCTGCTAGCATGTGGCAAACAACCTAACTTGTTAACTTCTAAGTAGGGT14.761904761904762No Hit
GTATAATCCACGACTCTTAAATGATATTGGTCAGTAAAACTAAGCGTCGT14.761904761904762No Hit
GTAGTATGTAGGCCATTTCCCAGTAGTGTGACGCCACTTTCCATTGCTGG14.761904761904762No Hit
CAGGGGACTAGGCCAGTGCCTTCCCCAGCCATGAGGAGACGCGAGAGGAT14.761904761904762No Hit
GTGCCCACTGTGGTCAGGACTGAGGGCGAGCTCTGCTTTGGCACAGAAGC14.761904761904762No Hit
GCCGCGGGGGGGGGGGTCCGGCGGGCGGAGCGCCGGTGGGGCGGCGCCGG14.761904761904762No Hit
CACAGAGAGAGAGAGAGAGAGAGAACGCATGAGCCTGAGCCTAGCCCACC14.761904761904762No Hit
GACCTGAGCTGAAAGCAGACGCTTACCTAAGCCTCCCAGGTGCCCCGACA14.761904761904762No Hit
AAGCAGGAGTGGGGGTGCACAGGTGCCTATAATGAGTGGGAGGGAGCCCC14.761904761904762No Hit
ACAAAAGGCTCATTCAAAATGCAAGACAAAAAAAAAAAAAGCAAGACAGA14.761904761904762No Hit
GTTGTAACCTAAACCTAAATTTGGACCAAAAACATTGCATTAAGAAGCCA14.761904761904762No Hit
AGTGGAAGGTGAGCAGGCAATCAGGCTTACTGGACACAAATATCTACTCT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)