FastQCFastQC Report
Tue 26 Oct 2021
HK7CCDRXY_n02_CAWT1_YPD_8H.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7CCDRXY_n02_CAWT1_YPD_8H.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52373297
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTGTTTATTTGTTTGTTTATGCTTCTGGACCAGCAGCTTTAAC3061070.5844715103576542No Hit
TTTTTTTTTCTGTTTATTTGTTTGTTTATGCTTCTGGACCAGCAGCTTTA2180260.4162922949074602No Hit
TTTTTTTTTATGTTTATTTGTTTGTTTATGCTTCTGGACCAGCAGCTTTA1316720.2514105613782535No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG709830.13553280787344743No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)