FastQCFastQC Report
Tue 26 Oct 2021
HK7CCDRXY_n02_CAWT1_C-LIM_72H.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK7CCDRXY_n02_CAWT1_C-LIM_72H.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104221427
Sequences flagged as poor quality0
Sequence length101
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5534200.5310040515948797No Hit
TTTTTTTTTCTTTCTTTAAATGGGAAGAATTGATGATAATCCCATTGCGT2643180.2536119563974114No Hit
TTTTTTTTTGTTTCTTTCTTTAAATGGGAAGAATTGATGATAATCCCATT2003500.19223494224464996No Hit
TTTTTTTTTCAAGTGTTTTGGTTAGATTATTCGGTGACAGTTTCTTGGAC1049890.10073648291152261No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)