FastQCFastQC Report
Thu 6 Apr 2023
HK77KDMXY_n01_NYULF_0806.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK77KDMXY_n01_NYULF_0806.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACAGCAAGGAGCAGGAGCAGCAGAAACCAGAAGAAAGGAGTGCAACTT111.11111111111111No Hit
TTAAAACTTTCCAGGAACTGCTAAGAGATGACAAAATGTAGCACATGGTA111.11111111111111No Hit
TCAACTTATCTTACACCATTTTGTAGAGAATTAAATTCACTACAGGTTGT111.11111111111111No Hit
GATTGCTATGCCATCCCATTGAAATTCGCCCAACATTAGATTCAGAGATA111.11111111111111No Hit
GTCCCCGATTCGGAGGCCGGAAGCTACGCCGGCGACGACGTTCTCCGCGT111.11111111111111No Hit
TTTAAAAGACTATAGAATAAGGGCTAAATATTCGCTACGCAAAACAAACA111.11111111111111No Hit
ACCGCACACCACCCAGTAACCTACCACCGTCGACTCGTTCCAAACTCTTA111.11111111111111No Hit
TCAACACCCAAATCCAGTAAACTGGAATGGAGCTGATATCATGATTATGA111.11111111111111No Hit
CTTCCCAATAATTGTTCTACGAGAACTGTATACAGGTCACAACTAAATCC111.11111111111111No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)