HK72VBGXX_n01_nlp7_4tu_5.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HK72VBGXX_n01_nlp7_4tu_5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5317510
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTAT	52623	0.9896173208889123	TruSeq Adapter, Index 16 (97% over 40bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	16539	0.31102903426603806	No Hit
CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTG	13816	0.2598208560021514	No Hit
ACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTT	11719	0.22038510505857065	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	6225	59.876003	48
CGTATGC	6260	59.54179	46
GTATGCC	6260	59.485325	47
GCCGTCT	6265	59.38311	51
ATGCCGT	6305	59.11683	49
TGCCGTC	6310	58.95961	50
TCTCGTA	6540	56.67258	43
CCGTCTT	6715	55.50784	52
ATCTCGT	6870	53.644653	42
GTCCCGA	6925	52.86432	36
CGTCCCG	7055	52.08864	35
CCCGTCC	7155	51.458946	33
CCGTCCC	7250	50.73638	34
TGCTTGA	7540	49.43437	60
CTGCTTG	7550	49.41571	59
CTCGTAT	7620	48.7785	44
GCTTGAA	7655	48.737442	61
TCGTATG	7735	48.279522	45
CACCCGT	7910	46.72468	31
ACCCGTC	7935	46.532925	32