HK72VBGXX_n01_nlp7_4tu_180_a.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HK72VBGXX_n01_nlp7_4tu_180_a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6487690
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTAT	78529	1.21043083131284	TruSeq Adapter, Index 18 (97% over 40bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	17477	0.2693871008016721	No Hit
CGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTG	7468	0.11511030890810135	No Hit
ACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTT	6618	0.10200857315932173	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	9240	61.20954	48
CGTATGC	9235	61.16689	46
GCCGTCT	9365	60.429913	51
ATGCCGT	9415	60.146164	49
GTATGCC	9400	60.129974	47
TGCCGTC	9530	59.420372	50
CCGTCTT	10100	56.06694	52
TCTCGTA	10180	55.48925	43
TCCGCAC	10305	54.713432	35
CATCTCG	10475	53.826305	41
CGTCCGC	10525	53.704437	33
CTCGTAT	10540	53.627182	44
CCGCACA	10590	53.307068	36
TCGTATG	10660	53.089165	45
GTCCGCA	10710	52.678734	34
CTGCTTG	10825	52.311073	59
ATCTCGT	10830	52.288136	42
ACGTCCG	10845	52.152073	32
CGCACAT	10855	52.0057	37
GCACATC	10930	51.584805	38