HK72VBGXX_n01_nlp7_4tu_0.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HK72VBGXX_n01_nlp7_4tu_0.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7896460
Sequences flagged as poor quality	0
Sequence length	76
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTAT	188458	2.3866137484391743	TruSeq Adapter, Index 15 (97% over 40bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	13292	0.16832859281247547	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	21095	63.178284	48
GCCGTCT	21220	62.83871	51
CGTATGC	21235	62.745274	46
ATGCCGT	21265	62.656357	49
GTATGCC	21315	62.542614	47
TGCCGTC	21420	62.18741	50
CTCGTAT	22150	59.948284	44
CCGTCTT	22265	59.873676	52
TCTCGTA	22190	59.824448	43
TCGTATG	22440	59.469883	45
CTGCTTG	22850	58.49434	59
ATCTCGT	22945	57.916954	42
AATCTCG	23435	56.66117	41
TGCTTGA	24320	54.95836	60
GCTTGAA	24360	54.86812	61
CTTCTGC	24980	53.562675	56
TTCTGCT	25075	53.38766	57
TCTGCTT	25465	52.624996	58
ATGTCAG	25880	51.57991	34
TGTCAGA	25990	51.27983	35