FastQCFastQC Report
Tue 3 Nov 2015
HK5NHBGXX_l03n02_ntr_69.3520000003979a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK5NHBGXX_l03n02_ntr_69.3520000003979a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98818
Sequences flagged as poor quality0
Sequence length36
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCATCC200.005132821429.9903858
CTCTATA200.005132821429.9903851
TCTGCAC300.001220913824.9919873
Produced by FastQC (version 0.11.2)