FastQCFastQC Report
Tue 3 Nov 2015
HK5NHBGXX_l01n01_ntr_2.35100000038691.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK5NHBGXX_l01n01_ntr_2.35100000038691.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length36
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTTGATTTTATTGCAAAGGGAGAAGGAGAAATA116.666666666666664No Hit
CTTCAAATTCTTCTGAAGTGGCGGTATCAAAGTTGT116.666666666666664No Hit
CCAGATGCTGTTTATCCCAAATATCATACCAAAAAT116.666666666666664No Hit
ATATCATTTAGTTTCAAATAGTCGAGGTGCAGAACA116.666666666666664No Hit
GATCATTCCAACTTTTGCATCAAGTCGTTCATTGAA116.666666666666664No Hit
GGCTAGTAATCCACTAAATCCTTCAGCGCTTATACA116.666666666666664No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)