[2023-07-22 07:00:13,660] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2023-07-22 07:00:13,660] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2023-07-22 07:00:13,660] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-07-22 07:00:13,662] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2023-07-22 07:00:13,662] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2023-07-22 07:00:13,663] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HK5J2BGXT/merged [2023-07-22 07:00:15,039] multiqc [WARNING] MultiQC Version v1.14 now available! [2023-07-22 07:00:15,039] multiqc [INFO ] This is MultiQC v1.9 [2023-07-22 07:00:15,039] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HK5J2BGXT/merged [2023-07-22 07:00:15,039] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HK5J2BGXT/merged [2023-07-22 07:00:15,039] multiqc [INFO ] Template : default [2023-07-22 07:00:15,039] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2023-07-22 07:00:15,039] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HK5J2BGXT/merged [2023-07-22 07:00:15,039] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2023-07-22 07:00:15,040] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-35626569/tmpr_s27_ds [2023-07-22 07:00:15,146] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_H3k4me3_fastqc.html [2023-07-22 07:00:15,149] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_H3k4me3_fastqc.html [2023-07-22 07:00:15,194] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_BPTF_fastqc.html [2023-07-22 07:00:15,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_BPTF_fastqc.html [2023-07-22 07:00:15,237] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_undetermined_fastqc.html [2023-07-22 07:00:15,239] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_undetermined_fastqc.html [2023-07-22 07:00:15,280] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_IgG_fastqc.html [2023-07-22 07:00:15,282] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_IgG_fastqc.html [2023-07-22 07:00:15,322] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2023-07-22 07:00:15,323] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2023-07-22 07:00:15,450] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_IgG_fastqc.html [2023-07-22 07:00:15,451] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_IgG_fastqc.html [2023-07-22 07:00:15,493] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_IgG_fastqc.html [2023-07-22 07:00:15,495] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_IgG_fastqc.html [2023-07-22 07:00:15,536] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_SRF_fastqc.html [2023-07-22 07:00:15,538] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_SRF_fastqc.html [2023-07-22 07:00:15,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_BPTF_fastqc.html [2023-07-22 07:00:15,581] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_BPTF_fastqc.html [2023-07-22 07:00:15,622] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_H3k4me3_fastqc.html [2023-07-22 07:00:15,624] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_H3k4me3_fastqc.html [2023-07-22 07:00:15,665] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_H3k4me3_fastqc.html [2023-07-22 07:00:15,667] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_H3k4me3_fastqc.html [2023-07-22 07:00:15,709] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_BPTF_fastqc.html [2023-07-22 07:00:15,711] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_BPTF_fastqc.html [2023-07-22 07:00:15,751] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_SRF_fastqc.html [2023-07-22 07:00:15,753] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_SRF_fastqc.html [2023-07-22 07:00:15,794] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_BPTF_fastqc.html [2023-07-22 07:00:15,796] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_BPTF_fastqc.html [2023-07-22 07:00:15,837] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_BPTF_fastqc.html [2023-07-22 07:00:15,839] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_BPTF_fastqc.html [2023-07-22 07:00:15,881] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_SRF_fastqc.html [2023-07-22 07:00:15,883] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep3_SRF_fastqc.html [2023-07-22 07:00:15,925] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_SRF_fastqc.html [2023-07-22 07:00:15,927] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_SRF_fastqc.html [2023-07-22 07:00:15,968] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_IgG_fastqc.html [2023-07-22 07:00:15,970] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_IgG_fastqc.html [2023-07-22 07:00:16,011] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_SRF_fastqc.html [2023-07-22 07:00:16,013] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep3_SRF_fastqc.html [2023-07-22 07:00:16,054] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_H3k4me3_fastqc.html [2023-07-22 07:00:16,056] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_H3k4me3_fastqc.html [2023-07-22 07:00:16,098] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_IgG_fastqc.html [2023-07-22 07:00:16,099] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep2_IgG_fastqc.html [2023-07-22 07:00:16,142] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_SRF_fastqc.html [2023-07-22 07:00:16,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_SRF_fastqc.html [2023-07-22 07:00:16,186] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_undetermined_fastqc.html [2023-07-22 07:00:16,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_undetermined_fastqc.html [2023-07-22 07:00:16,229] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_BPTF_fastqc.html [2023-07-22 07:00:16,231] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n02_Rep1_BPTF_fastqc.html [2023-07-22 07:00:16,272] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_IgG_fastqc.html [2023-07-22 07:00:16,274] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_IgG_fastqc.html [2023-07-22 07:00:16,316] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_H3k4me3_fastqc.html [2023-07-22 07:00:16,318] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep2_H3k4me3_fastqc.html [2023-07-22 07:00:16,359] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_H3k4me3_fastqc.html [2023-07-22 07:00:16,361] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HK5J2BGXT_n01_Rep1_H3k4me3_fastqc.html [2023-07-22 07:00:16,692] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2023-07-22 07:00:16,694] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2023-07-22 07:00:16,702] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2023-07-22 07:00:16,709] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 13 samples (table) [2023-07-22 07:00:16,718] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2023-07-22 07:00:16,724] multiqc [DEBUG ] No samples found: conpair [2023-07-22 07:00:16,729] multiqc [DEBUG ] No samples found: peddy [2023-07-22 07:00:16,734] multiqc [DEBUG ] No samples found: somalier [2023-07-22 07:00:16,739] multiqc [DEBUG ] No samples found: methylQA [2023-07-22 07:00:16,748] multiqc [DEBUG ] No samples found: mosdepth [2023-07-22 07:00:16,753] multiqc [DEBUG ] No samples found: phantompeakqualtools [2023-07-22 07:00:16,757] multiqc [DEBUG ] No samples found: qualimap [2023-07-22 07:00:16,762] multiqc [DEBUG ] No samples found: preseq [2023-07-22 07:00:16,767] multiqc [DEBUG ] No samples found: quast [2023-07-22 07:00:16,772] multiqc [DEBUG ] No samples found: qorts [2023-07-22 07:00:16,777] multiqc [DEBUG ] No samples found: rna_seqc [2023-07-22 07:00:16,782] multiqc [DEBUG ] No samples found: rockhopper [2023-07-22 07:00:16,787] multiqc [DEBUG ] No samples found: rsem [2023-07-22 07:00:16,799] multiqc [DEBUG ] No samples found: rseqc [2023-07-22 07:00:16,803] multiqc [DEBUG ] No samples found: busco [2023-07-22 07:00:16,808] multiqc [DEBUG ] No samples found: goleft_indexcov [2023-07-22 07:00:16,812] multiqc [DEBUG ] No samples found: disambiguate [2023-07-22 07:00:16,818] multiqc [DEBUG ] No samples found: supernova [2023-07-22 07:00:16,832] multiqc [DEBUG ] No samples found: deeptools [2023-07-22 07:00:16,837] multiqc [DEBUG ] No samples found: sargasso [2023-07-22 07:00:16,842] multiqc [DEBUG ] No samples found: verifybamid [2023-07-22 07:00:16,848] multiqc [DEBUG ] No samples found: mirtrace [2023-07-22 07:00:16,853] multiqc [DEBUG ] No samples found: happy [2023-07-22 07:00:16,858] multiqc [DEBUG ] No samples found: mirtop [2023-07-22 07:00:16,864] multiqc [DEBUG ] No samples found: homer [2023-07-22 07:00:16,869] multiqc [DEBUG ] No samples found: macs2 [2023-07-22 07:00:16,874] multiqc [DEBUG ] No samples found: theta2 [2023-07-22 07:00:16,879] multiqc [DEBUG ] No samples found: snpeff [2023-07-22 07:00:16,887] multiqc [DEBUG ] No samples found: gatk [2023-07-22 07:00:16,891] multiqc [DEBUG ] No samples found: htseq [2023-07-22 07:00:16,897] multiqc [DEBUG ] No samples found: bcftools [2023-07-22 07:00:16,902] multiqc [DEBUG ] No samples found: featureCounts [2023-07-22 07:00:16,909] multiqc [DEBUG ] No samples found: fgbio [2023-07-22 07:00:16,924] multiqc [DEBUG ] No samples found: dragen [2023-07-22 07:00:16,929] multiqc [DEBUG ] No samples found: dedup [2023-07-22 07:00:16,934] multiqc [DEBUG ] No samples found: damageprofiler [2023-07-22 07:00:16,960] multiqc [DEBUG ] No samples found: biobambam2 [2023-07-22 07:00:16,964] multiqc [DEBUG ] No samples found: mtnucratio [2023-07-22 07:00:16,966] multiqc [DEBUG ] No samples found: picard [2023-07-22 07:00:16,971] multiqc [DEBUG ] No samples found: prokka [2023-07-22 07:00:16,976] multiqc [DEBUG ] No samples found: samblaster [2023-07-22 07:00:16,985] multiqc [DEBUG ] No samples found: samtools [2023-07-22 07:00:16,990] multiqc [DEBUG ] No samples found: sexdeterrmine [2023-07-22 07:00:16,996] multiqc [DEBUG ] No samples found: bamtools [2023-07-22 07:00:17,000] multiqc [DEBUG ] No samples found: jellyfish [2023-07-22 07:00:17,009] multiqc [DEBUG ] No samples found: vcftools [2023-07-22 07:00:17,014] multiqc [DEBUG ] No samples found: longranger [2023-07-22 07:00:17,019] multiqc [DEBUG ] No samples found: stacks [2023-07-22 07:00:17,024] multiqc [DEBUG ] No samples found: varscan2 [2023-07-22 07:00:17,039] multiqc [DEBUG ] No samples found: bbmap [2023-07-22 07:00:17,044] multiqc [DEBUG ] No samples found: bismark [2023-07-22 07:00:17,049] multiqc [DEBUG ] No samples found: biscuit [2023-07-22 07:00:17,054] multiqc [DEBUG ] No samples found: hicexplorer [2023-07-22 07:00:17,059] multiqc [DEBUG ] No samples found: hicup [2023-07-22 07:00:17,064] multiqc [DEBUG ] No samples found: hicpro [2023-07-22 07:00:17,068] multiqc [DEBUG ] No samples found: salmon [2023-07-22 07:00:17,073] multiqc [DEBUG ] No samples found: kallisto [2023-07-22 07:00:17,078] multiqc [DEBUG ] No samples found: slamdunk [2023-07-22 07:00:17,083] multiqc [DEBUG ] No samples found: star [2023-07-22 07:00:17,088] multiqc [DEBUG ] No samples found: hisat2 [2023-07-22 07:00:17,092] multiqc [DEBUG ] No samples found: tophat [2023-07-22 07:00:17,097] multiqc [DEBUG ] No samples found: bowtie2 [2023-07-22 07:00:17,102] multiqc [DEBUG ] No samples found: bowtie1 [2023-07-22 07:00:17,107] multiqc [DEBUG ] No samples found: snpsplit [2023-07-22 07:00:17,111] multiqc [DEBUG ] No samples found: kat [2023-07-22 07:00:17,116] multiqc [DEBUG ] No samples found: leehom [2023-07-22 07:00:17,121] multiqc [DEBUG ] No samples found: adapterRemoval [2023-07-22 07:00:17,125] multiqc [DEBUG ] No samples found: clipandmerge [2023-07-22 07:00:17,130] multiqc [DEBUG ] No samples found: cutadapt [2023-07-22 07:00:17,134] multiqc [DEBUG ] No samples found: flexbar [2023-07-22 07:00:17,139] multiqc [DEBUG ] No samples found: kaiju [2023-07-22 07:00:17,144] multiqc [DEBUG ] No samples found: kraken [2023-07-22 07:00:17,149] multiqc [DEBUG ] No samples found: malt [2023-07-22 07:00:17,154] multiqc [DEBUG ] No samples found: trimmomatic [2023-07-22 07:00:17,158] multiqc [DEBUG ] No samples found: sickle [2023-07-22 07:00:17,163] multiqc [DEBUG ] No samples found: skewer [2023-07-22 07:00:17,168] multiqc [DEBUG ] No samples found: sortmerna [2023-07-22 07:00:17,172] multiqc [DEBUG ] No samples found: biobloomtools [2023-07-22 07:00:17,177] multiqc [DEBUG ] No samples found: fastq_screen [2023-07-22 07:00:17,182] multiqc [DEBUG ] No samples found: afterqc [2023-07-22 07:00:17,187] multiqc [DEBUG ] No samples found: fastp [2023-07-22 07:00:18,950] multiqc.modules.fastqc.fastqc [INFO ] Found 26 reports [2023-07-22 07:00:19,494] multiqc [DEBUG ] No samples found: pycoqc [2023-07-22 07:00:19,499] multiqc [DEBUG ] No samples found: minionqc [2023-07-22 07:00:19,503] multiqc [DEBUG ] No samples found: multivcfanalyzer [2023-07-22 07:00:19,509] multiqc [DEBUG ] No samples found: clusterflow [2023-07-22 07:00:19,514] multiqc [DEBUG ] No samples found: bcl2fastq [2023-07-22 07:00:19,519] multiqc [DEBUG ] No samples found: interop [2023-07-22 07:00:19,524] multiqc [DEBUG ] No samples found: ivar [2023-07-22 07:00:19,528] multiqc [DEBUG ] No samples found: flash [2023-07-22 07:00:19,533] multiqc [DEBUG ] No samples found: seqyclean [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,533] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2023-07-22 07:00:19,534] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2023-07-22 07:00:19,565] multiqc [INFO ] Compressing plot data [2023-07-22 07:00:20,046] multiqc [INFO ] Report : multiqc_report.html [2023-07-22 07:00:20,046] multiqc [INFO ] Data : multiqc_data [2023-07-22 07:00:20,046] multiqc [DEBUG ] Moving data file from '/state/partition1/job-35626569/tmpr_s27_ds/multiqc_data' to '/scratch/gencore/logs/html/HK5J2BGXT/merged/multiqc_data' [2023-07-22 07:00:20,172] multiqc [INFO ] MultiQC complete