FastQCFastQC Report
Fri 11 Aug 2023
HK3JJBGXT_n01_daplib_ShaAmpPoolHm-input_ad7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3JJBGXT_n01_daplib_ShaAmpPoolHm-input_ad7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1709
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGACACAAAGCCAAAGACTCATATGGACTTTGGCTACACCATGAAAG20.11702750146284377No Hit
TGCTGAAGACAATTACAGGGTTCTTGCTGATGCTATCTTCGATAGCCATG20.11702750146284377No Hit
AAGATCGGGTTGCGGTTTAAGTTCTTATACTCAATCATACACATGACATC20.11702750146284377No Hit
ATACACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTC20.11702750146284377No Hit
GGTTTAAGTTCTTATACTCAATCATACACATGAGATCAAGTCATATTCGA20.11702750146284377No Hit
TAGAAGATACAAAGCCGAAGACTCATACAGACTTTGTCTACAACATGAAA20.11702750146284377No Hit
AATTCTTACGCCTTTAAGATCCGGTTGCGGTTTAAGTTCTTATACTCAAT20.11702750146284377No Hit
TTTAAGATCGGGTTGCGGTTTAAGTTGTTATACTCAATCATACACATGAC20.11702750146284377No Hit
GTGTAGCCAAAGTCCATATGAGTCTTTGGCTTTGTGTCTTCTAACAAGGA20.11702750146284377No Hit
TGCTTCTCAAAGCTTTCATGGTGTAGCCAAAGTCCATATGAGTCTTTGGC20.11702750146284377No Hit
TGCTTATGTACTATGTTCCAAACAAGCCGCTACGTGTTCGTCGAGCTTTA20.11702750146284377No Hit
TTAAGTTCTTATACTCAATCATACACATGACATCAAGTCATATTCGACTC20.11702750146284377No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)