FastQCFastQC Report
Fri 11 Aug 2023
HK3JJBGXT_n01_daplib_KyoAmpPoolHm-input_ad2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3JJBGXT_n01_daplib_KyoAmpPoolHm-input_ad2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1164
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAAACACTAACCAAACTTCTTCTAGCTTCTCTAAGCTTTCATGGTGTAG20.1718213058419244No Hit
AACACTAACCAACCTTCTTCTTGCTTCTCAAAGCTTTCATGGTGTAGCCA20.1718213058419244No Hit
ACTCTTCTCACTATGCACCTTCGTGAGCGTCTCCCCAAGCTTTCTCTTCC20.1718213058419244No Hit
TCAATCATACACATGACATCAAGTCATATTCGACTCCAAAACACTAACCA20.1718213058419244No Hit
ACTCATATGGACTTTGGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAA20.1718213058419244No Hit
ATAAGATCGGGTTGCGGTTTAAGTTCTTATACTCAATCATACACATGACA20.1718213058419244No Hit
ATACACATGAGATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTC20.1718213058419244No Hit
AGAACATACAAAGCCAAAGACTCATACGGACTTTGGCTACACCATGAAAG20.1718213058419244No Hit
AATATGACTTGATGTCATGTGTATGATTGAGTATAAGAACTTAAACCGCA20.1718213058419244No Hit
GTGCTACTCGAAATCTTTGCTACCCGTCTCGTTCCAGTTCCTAGCCGCAA20.1718213058419244No Hit
AAGGAAACACTACTTAGGCTTTTAAGATCGGGTTGCGGTTTAAGTTGTTA20.1718213058419244No Hit
GACTTGTTGTCATGTGTATGATTGAGTATAACAACTTAAACCGCAACTCG20.1718213058419244No Hit
AAAGCCAAAGACTCATACGGACTTTGGCTACACCATGAAAGCTTTGAGAA20.1718213058419244No Hit
ATGATTGAGTATAAGAACTTAAACCGCAACCCGATCTTATAAGCCTAAGT20.1718213058419244No Hit
GGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAAGGTTGGTTAGTGTTT20.1718213058419244No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)