FastQCFastQC Report
Fri 11 Aug 2023
HK3JJBGXT_n01_daplib_CviAmpPoolHm-input_ad8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3JJBGXT_n01_daplib_CviAmpPoolHm-input_ad8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1088
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGCGGTTTAAGTTGTTATACTCAATCATACACATGACATCAAGTCATA20.1838235294117647No Hit
AAGATCGGGTTGCGGTTTAAGTTGTTATACTCAATCATACACATGACAAC20.1838235294117647No Hit
ATGACATCAAGTCATATTCGACCCCAAAACACTAACCAACCTTCTTCTAG20.1838235294117647No Hit
ACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTCTTCT20.1838235294117647No Hit
GTTGCGGTTTAAGTTCTTATACTCAATCATACACATGACATCAAGTCATA20.1838235294117647No Hit
AATCCCACCCAAAACCTGTCGATAAGTGAAACGACATCATTACCCATACG20.1838235294117647No Hit
TTAAGTTCTTATACTCAATCATACACATGACATCAAGTCATATTCGACTC20.1838235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)