FastQCFastQC Report
Fri 11 Aug 2023
HK3JJBGXT_n01_daplib_C24AmpPoolHm-input_ad2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3JJBGXT_n01_daplib_C24AmpPoolHm-input_ad2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1728
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGAGTCTTTGGCTTTGTGTCTTCTAACAAGGAAACACTACTTAGGCTT20.11574074074074073No Hit
TATACTCAATCATACACATGACATCAAGTCATATTCGACTCCAAAACACT20.11574074074074073No Hit
AGTGGTGATCGGATAGCTAGTGTTCGTAGGCTCCATGCTCGCGCATCGAA20.11574074074074073No Hit
TTATGATCATCCCGTTTGTTAGTAACATCGTCGACAATGTCCCGATGACA20.11574074074074073No Hit
GGAATCTGGATATCATAAATTTTCATGGAATTTTTTTAGAATAGTAGAAA20.11574074074074073No Hit
AATGCACCGGATCCCATCAGAACTCCGCAGTTAAGCGTGCTTGGGCGAGA20.11574074074074073No Hit
AAAGCCAAAGACTCATATGGACTTTGGCTACACCATGAAAGCTTTGAGAA20.11574074074074073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)