FastQCFastQC Report
Fri 11 Aug 2023
HK3JJBGXT_n01_daplib_An1AmpPoolHm-input_ad3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3JJBGXT_n01_daplib_An1AmpPoolHm-input_ad3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1358
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGAAGACACAAAGCCAAAGACTCATATGGACTTTGGCTACACCATGAAA20.14727540500736377No Hit
AATCATACACATGACATCAAGTCATATTTGACTCCAAAACACTAACCAAC20.14727540500736377No Hit
ACACTACTTAGGCTTATAAGATCGGGTTGCGGTTTAAGTTCTTATACTCA20.14727540500736377No Hit
CACTCCGTCTCCGGGGAGGCGAATGCCAGCCGTTCGTTTGCATGTTCCTT20.14727540500736377No Hit
CTTACAAGATCGGGTTGCGGTTTAAGTTCTTATACTCAATCATACACATG20.14727540500736377No Hit
ACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTATTCT20.14727540500736377No Hit
GATCGGGTTGCGGTTTATGTTCTTATACTCAATCATACACATGACATCAA20.14727540500736377No Hit
TTCTCAAAGCTTTCATGGTGTAGCCAAAGTCCATATGAGTCTTTGGCTTT20.14727540500736377No Hit
GTCGAATATGACTTGATGTCATGTGTATGATTGAGTATAACAACTTAAAC20.14727540500736377No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)