FastQCFastQC Report
Fri 11 Aug 2023
HK3JJBGXT_n01_AtbZIP26_C24AmpPoolHm-B_ad6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3JJBGXT_n01_AtbZIP26_C24AmpPoolHm-B_ad6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8580
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTGACGTGGCGTAACCCTCTTTAATTATGACGTAAGTGTGAAAAGAAG210.24475524475524477No Hit
AATGATACCATCGGGTCTAATGACGTCATCGGGTCGGATAATCTCAGCGG190.22144522144522147No Hit
AAAGTTTTCACCAAAATTAAAATCTCACACTTTTTAATATTTCAACGTGG130.15151515151515152No Hit
CAGGAGCCGCCGCAACGGCAGCGGTCGAGGGTTGACGGAGGGTGACGTTA120.13986013986013987No Hit
GACATGGAATCGTCCTTGGTTGATCAGTGTCAAGAACCGATGCAAAACGA120.13986013986013987No Hit
ATATATGTCAAACATCAGACTTCATATATATTGAAAAGAAATCTATTATT100.11655011655011654No Hit
CATGCCAATGAGATGGTTGCATCATCATCATCATCATCATTGACATTGTC100.11655011655011654No Hit
TTTGAAGGCTCTAGAGTTGGTTTCCAACATCGACCGAATCTCAACTTATG100.11655011655011654No Hit
CATCAGATCCTACGGTTATAAATCCATTTGTTGTGTATCCACGTGAACTG90.1048951048951049No Hit
AGTCGTTGATGACGACAAATTGATGACGAGTTTGTTCTTCTAATGGCCTT90.1048951048951049No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)