FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n02_Flu09_G02_FluB_Rep1_Plate4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n02_Flu09_G02_FluB_Rep1_Plate4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences787184
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTAACAAGAGCTATGTTTAGGTCTCTCTCTCCTTGACACCTGACACA27440.34858432081952884No Hit
GTTTAGGTCTCTCTCTCCTTGACACCTGACACAATACCTTCCCACAATAG16810.21354600703266327No Hit
ATGTTTAGGTCTCTCTCTCCTTGACACCTGACACAATACCTTCCCACAAT13330.16933779141852479No Hit
CAACAGCATAGAGGACCATTTCCAATCTCTCATTCCTTATCTTTTCATAG12650.16069940445944025No Hit
AACAAGAGCTATGTTTAGGTCTCTCTCTCCTTGACACCTGACACAATACC11420.14507408687168438No Hit
AGTAGAAACAACGCACTTTACTGAAGAATCTAAGCTGGAACAAATAATAT10210.1297028394886075No Hit
CTTCATAATCAGAACAAACATGTGATTGAGTGGAACAAGCTAGTGCTAGC10050.12767027785117582No Hit
CACGAGCATAGAGGACCATTTCCAATCTCTCATTCCTTATCTTTTCATAG9790.1243673651903494No Hit
ACACAATACCTTCCCACAATAGCCACTTCATAATCAGAACAAACATGTGA9410.11954003130144923No Hit
TTACTGAAGAATCTAAGCTGGAACAAATAATATGAAGTTTCTCACATTCT8930.11344234638915425No Hit
ATATATATCTTCACACAAATATGAAAGTCAGCTCTAGAAATAACAGAATG8410.10683652106750136No Hit
GTAGTAACAAGAGCCAACACCACAGCCATCTCAATTGGTTAAATTTACAC8410.10683652106750136No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)