FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n02_Flu09_E02_FluA_Rep1_Plate3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n02_Flu09_E02_FluA_Rep1_Plate3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAACGCATTCTGACACAACAGAATCAAACCACACCAAATGTTAAAGA11.36986301369863No Hit
TTCTCATCCATCAGCTCCCACTTTAAGCAGACTTCAGGGATGTGAAGATT11.36986301369863No Hit
GCCAACAGAACATGTGGGCAAAGCGCCGATGAGCTGTTCTGGAGCACGGG11.36986301369863No Hit
GACTTATGATTGGACATTAAACAGAAATCAACCGGCAGCAACTGCATTGG11.36986301369863No Hit
GGTGGGAGGAGAACCAGAGCCGACTGCGTGACAGAGGGGGCAGAGGTTCC11.36986301369863No Hit
GGATTGCAGTGGTACGATCTCAGCTCACTGCAGCCCCCCCCTCCCATACT11.36986301369863No Hit
GGCACGTGCCACTGTGCTCAGCTAATTTTTCTATTTTTAGTAGAGATGGG11.36986301369863No Hit
ATCAAAGAGTGAGGAGCTGACAGAAGAGTTTGAGCCACAGCTTCCTGCGA11.36986301369863No Hit
CCTTCTAACCGAGGTCGAAACGTATGTTCTCTCTATCGTTCCATCAGGCC11.36986301369863No Hit
AATAAATTCTGATGGTCTCATTGGATGAAACTTCTATTAATAGAAAAGTT11.36986301369863No Hit
GGGGACACATGGGCAAGGCCCATAGTGGTTGAGGCCTTGCTGGCGTGGCT11.36986301369863No Hit
GAGCCTTTCCAGTTGTCTCTGCAGACACATCTGACACCAGGATATCGAGG11.36986301369863No Hit
GGATATACCTGGAATGGTTATAGAATAGAGTGCCTTCCATACAACAGCAA11.36986301369863No Hit
GATTAGTGTTTCCTCCACTCCTGGTCCTTATGGCCCAGTACCCGCTTCTC11.36986301369863No Hit
CTCCAAAAATATTTGCTAAGGAAAATGATCAAGTGTATGCCTGCGTGAAC11.36986301369863No Hit
TTGTGACTAACACAAGATGTACCTTGCACACCAAAGTTGCCTTGTCGACA11.36986301369863No Hit
CTGTAGTGCAGTGGTGTGATCTTGGCTCACTACAGCCTTGACCTCCCAGG11.36986301369863No Hit
CCCTTAATAAAGGACATTGGTGATGACTTTTGTACTCAATAACTACGAGG11.36986301369863No Hit
AGTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGTCAACATCCA11.36986301369863No Hit
CGTTCAGTACTATGTTCTTTTACATTACCGCCTGGTAAAATCGCCCGCAA11.36986301369863No Hit
CTCCAGGACCCAACAGACTAGTGAACTGGGTGCCTTTAGGTACGTAGAGG11.36986301369863No Hit
CCTTTGGCTTGTGTTGAGAATAGAACGATTCCTCTTGGGAATCCAGGAAT11.36986301369863No Hit
GCAGAAGGCCATGAACGCTCAGCCTTAGTGTATTTTCTCATGTTAATATA11.36986301369863No Hit
ATATTGTGTAGAATTAGACCTTCGTGGGCTTTGGAGCTGTGTTTGAATCC11.36986301369863No Hit
ATTGTGAACAGAATTGAGAATCAGACCATAGGTCGCAAAGACACGAGTAT11.36986301369863No Hit
GGATCCCTTGAGTCCAGGAGTTTGAGTCCAGCCTGGGCAACATAGCAAGA11.36986301369863No Hit
AACAGAAGAAGCTAAATGCTATAACACGCAGTGATCAATAAGCAAGAGAC11.36986301369863No Hit
GCCATAGGAACTTGCCCAATATGCGTGAAAACACCTTTGAAGCTTGCAAT11.36986301369863No Hit
AGATAACAGAGCTAGGATTCAAACACAGCTCCAAAGCCCACGAAGGCCTA11.36986301369863No Hit
ATCATGTGGGCATGAAAGGTCAAGAAATGAAACACTGGGTAACACAAATC11.36986301369863No Hit
ACAGAATCCAGACTGCAGGCAGGATGTGAGGTTGCTCCCTCTCCACCTGC11.36986301369863No Hit
TAGTAGGAGTAAAAATGGGCTGGGCATGGTGGCTCACACCAGTTTCCCAG11.36986301369863No Hit
TGATTTGGCATTCCAATTTGAATGATGCAACATACCAGAGGACAAGAGCT11.36986301369863No Hit
GGTGTGACTGATACTAAGGGAGACATCCTTGCTAGATTTCTTTCTATTGC11.36986301369863No Hit
ACTCATATCATGATTTGGCATTCCAACCTGAATGATGCCACATATCAGAG11.36986301369863No Hit
GTAGTAATGACTGATGGAAGTGCTTCAGGAAAAGCTGATACTAAAATACT11.36986301369863No Hit
GGTGGGATGTGAGGTTGCTCCCTCTCCACCTGCTTCAGCCCTGCCACTTA11.36986301369863No Hit
GGGTGGGGCGTTAGGTTCATGGCTTGGACACTGCCTTTGATCGAGGTCGG11.36986301369863No Hit
CAACTACCAAAAACTAATACCAAAAAATATCAACACTAAAAAAACCCAGA11.36986301369863No Hit
CACCCACATGGGCAGGTAGGGCCCCATGGTGTCCCTGGGCTGTCCAGTTC11.36986301369863No Hit
CACTTTGCAGTAGGTCCTCATGGTAGCACTGGCCACAGGGTCCTTGGAGC11.36986301369863No Hit
GGGTTCTGCAGTGGGCTCACTTTGCAGTAGGTCCTCATGGTAGCACTGGC11.36986301369863No Hit
CTGCTGCTCCTGTTGATATTCTTCCCTCATGGACTCAGGCACTCCTTCCG11.36986301369863No Hit
GTGTTTAGGAGGTATTTTAATTATTGTGTATAGGTAATCTTAACTTAAAA11.36986301369863No Hit
GACCTTAAGAGCACACAAGAAGCTATAAACAAGATAACAAAAAATCTCAA11.36986301369863No Hit
CTCCTTTTTTCTCCCCTGCAAATGTTTCTGTGACACTAAGTTGTCCTGTT11.36986301369863No Hit
GTCCCATCCTGTCCCAGTGAAGGGTGAGGACTCTGGACTTCTCTGGCTCT11.36986301369863No Hit
ACAAAAGTGAGCCTGAAAGTAAAAGGATGTCTCTTGAAGAGAGAAAAGCA11.36986301369863No Hit
GTTTGAGACCAGTCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAAT11.36986301369863No Hit
CAATATAGCTATAACATCACAAGAGCTGAATTTCCCATAGAGCTCTGCTT11.36986301369863No Hit
AATATGTGTTGTGTGTGTGCACGCGCACGCGCCCACACCCCCTAGAGAGA11.36986301369863No Hit
GGACCAATACAGGGGTACCACACTGGGTGCTGAGACTTGGCCTTCTTCAC11.36986301369863No Hit
GCACTGGAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTG11.36986301369863No Hit
GCTTGGGCATCAACATGCCCATATTAAAAAGAATCTTATACATGCATATA11.36986301369863No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGTG11.36986301369863No Hit
CTCCAAAGCCCACGAAGGCCTAATTCTACACCATATAAGTGAGAAGTCAG11.36986301369863No Hit
AGCAAAAGCAGGCCTGCCAGGTCTTAGCGGAGTTTCTGTGTTAGGAAGAG11.36986301369863No Hit
CCTTTAGGAACATTTCTTCACTCAGTTTTTTTCTCTGCAAAATGTTTGTA11.36986301369863No Hit
GGCGTGTGGGTGATGATGACCGTCAATCTATAAGGAAAACAAATGTCACC11.36986301369863No Hit
GCCTTTCACTCCATGACCACCTTCTTCATAGTTAGGATCCAAACAATGGC11.36986301369863No Hit
CAAGTACTAAAAAGAAGCGCCCTAGACATGGGTACAAGCAACCTACAAAA11.36986301369863No Hit
CTTCAGGGAGCTGCAGCTTTTCTTAGAAGGTGGAAAAAGAGAAAGAAGTG11.36986301369863No Hit
CGTCCCAAGGCACCAAACGGTCTTATGAACAGATGGAAACTGATGGAGAT11.36986301369863No Hit
CCATTCAGGTTGATTCTTTGTGATGTATGTAATCATCGCCAAAAACATTC11.36986301369863No Hit
GCCAATGGGTGCATCTGATCTCATTATTGAGCTTTTCCCACTTCGTATTT11.36986301369863No Hit
GCCCTGTCTGAACTCCAAATGTGAAGAGAGTTCATGCTTTACGACCATCA11.36986301369863No Hit
TGATGGCTTCAAAAGGTGATGAGCTGCCCATCACTGACAGCAGCCAAGCT11.36986301369863No Hit
GTAAAGGCTAATGGAATGGGAGACGCCCTTGAACAGAAAGGCTTTCACCC11.36986301369863No Hit
TTGTTGAATGGGTGTAACACCAAAAGTGAGTAAAGATCCCATTAATACTC11.36986301369863No Hit
CTATGTATTTTTGTGTTTGTAGCTATTGTGAATAGGATTGCATTCTTGAT11.36986301369863No Hit
GTGCTTGGGCAGTTGGTGGTGATGGGAGTGTTGCTTGATTGTAGCTCTGT11.36986301369863No Hit
GTCATAAATAACAACATTATAAAGAATTAACAAGGCCAAGCAACAGCCCA11.36986301369863No Hit
TGCTTGTAAAGAAGATACTAGTAGAACAATTGCTACCAATTCCTGCATAG11.36986301369863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)