FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n02_Flu09_E01_FluA_Rep1_Plate3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n02_Flu09_E01_FluA_Rep1_Plate3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATTAAAGCCTGAATTCTCACTAATATTCATTAGAATAATACATTATAG14.0No Hit
GCCTCTTGAGTAGCTGGGACTACAGGCATGTGCCACTGTGCTCAGCTAAT14.0No Hit
CTATGAGTGTGCTAATGAACTCAAGCCTGGGAAACACAGTGAGACCATAT14.0No Hit
GTATTTACACAGTCTCTCCAAAGCTTCCATAGGAAATTTTCGTTAGCTTT14.0No Hit
ATGTACCTGAGGTGCCACAAAACACAACAATACTGTTTGAGGTCCACAAG14.0No Hit
CTCCAGAGCAGCTTCTACAAACAATCTCACACTGCCTCGCCTGGTGGAAC14.0No Hit
ATTAAAAAGAGAACAGATTCATCGAAATTGAGTGACAAGGAGAGAAGTCC14.0No Hit
AGCACGCACTTTCTTAAAATGTCGCTGTTTGGAGACACAATTGCCTACCT14.0No Hit
GCATCACACAGTTCGAACTTGTCAAAAATAACGAAGCTAAAGTATTGTTA14.0No Hit
ATCACATCCTGTGCCTCCTTGGCACTGAGATCTGCATGGCCAGGGTTTGT14.0No Hit
AAGCAGAACTAGCAGAAAAATTACACTGTTGGTTCGGTGGGAAAGAATTT14.0No Hit
GTCTCAAACTCCTGACTTCAGATGGTCCACCTGCGTTGGCATCCCAAAGT14.0No Hit
CTAGATAAAAACGCAACCAAATATTCAAACTCAAACACAGCAAAACACAC14.0No Hit
AGCTTCAATACTTCACGAAGTCAGACCTGTTACATCCGGGTGCTTCCCTA14.0No Hit
GCTTATGAGAGAATGTGCAACATTCTTAAAGGAAAATTTCAAACAGCTGC14.0No Hit
TGTTTCTACTAATAACCAGGGGCTCGGGGGAGCATAAGCAGAGCACCAAA14.0No Hit
CCTATAAAGAGAAACCCTCTCCAAACGGCGGATTCAACTCCGGAAGTTCT14.0No Hit
TAGGACAGTATAGACAAATCTATACAGGACAGTACAATGTTCGAGGAAAT14.0No Hit
GCTCTTAACAATATGGCAACACATGTTTCCCTACTGTCAAAGACACATGA14.0No Hit
CAAAAAGCTGAACCAATCTTCAGGATGAATTTATTAAAATATAAAAATCT14.0No Hit
GGCCCTTTTGGTTGGAAGTAGGGAGGGAAAAGTGGGAGTGTGGACAGCCT14.0No Hit
GTATATACATTGAAGTTTTACATTTGACTCAAGGAACGTGTTGGGAACAA14.0No Hit
CCACAGAGGAGGGTACAGCGTGGACCAGAAGCCACCAGAAGCCGGGCGAG14.0No Hit
AGTTGCAGCACTTCTGGAACATCTGTTCATCCTCAACAATACCCCTTTGG14.0No Hit
GGCAAACAGAATCCACTTGGAAAACAAGGCGATAACACTAAAGACAAATT14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)