FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n02_Flu09_C07_FluB_Rep1_Plate4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n02_Flu09_C07_FluB_Rep1_Plate4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1440423
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATAGAACATGCTTGTAAATTCAAACATTCCAGTTTCGTTGCAGTAACT32990.22902994467597365No Hit
GTACTTCCTTCATTGCTTCTTTAGCCTGAATTTCTTTTTGGTAATTGTGT26940.18702839374267144No Hit
AAGCAGAACTAGCAGAAAAATTACACTGTTGGTTCGGTGGGAAAGAATTT24660.1711997100851625No Hit
GTATAGTATGGTTATCCAATCCATCATCATTTAAAGATGCAGCAGTAATG23130.16057783026236044No Hit
GGTTTTAGCTTTTCAAGTTCTTCAATGGTTTTGAAATCTCCAAGATCTGG22020.15287176058699423No Hit
GTAGAAGTACCATACATTTGTGCAGAAGGAGAAGACCAAATTACTGTTTG19360.13440496298656715No Hit
GTTCTATAGAGATGGATTTGTATCTAATTTTGCAATGGAAATTCCTTCAT18210.12642119710668326No Hit
GTATATGCTTCTCCATATTTTATTTTGAGCAATGCATTACTGTCGGGGCC17700.12288057049908256No Hit
GTTTCAAGCAGCCTCACAGAATGCCATGGAGGCACTAATGGTCACAACTG17340.12038130465842325No Hit
GTATTTACACAGTCTCTCCAAAGCTTCCATAGGAAATTTTCGTTAGCTTT16940.11760434261324626No Hit
GTATTAGTAGTTGAAAACTTGGCTAAAAATATCTGTGAAAATCTAGAACA16710.11600758943726946No Hit
CCTCTATGGAGACTCAAATCCTCAAAAGTTCACCTCATCTGCTAATGGAG15210.10559398176785569No Hit
CCATTAGAAAGATATAATGAAGAAACAAGAGCAAAATTAAGAAAGCTGAA14800.10274759567154926No Hit
GTCTACAGCAGAGGGACCCAGCATTTTCTTTAGTTTTCTCTCAAGTGCCA14730.10226162731364329No Hit
CTTTACATACAGTCCCATCCCCATTCTTTTGGTTTTAGACATCGTTCGAG14580.1012202665467019No Hit
GTACAAACGCATCAAATGTTCAGGCTGTGAATCGTTCTGCAGCAAAAGGG14540.1009425703421842No Hit
GGGATATATCTGTTCCAGCTGGTTTCTCCAATTTCGAAGGAATGAGGAGC14530.10087314629105479No Hit
CCATAGAGGTTCTTCATTTGGGTTTTGTTATCTGAATGGAACCCCCAAAC14490.10059545008653707No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)