FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n01_Flu09_E02_FluB_Rep1_Plate4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n01_Flu09_E02_FluB_Rep1_Plate4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1341738
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCACGCACTTGAGGGGAAAGCAAAAGGAGCAAGGAGGCGGTGGAGGCAG27690.20637412072997857No Hit
GTAGTAACAAGAGCCGGCAGCGATAGTTCTGTGACATTATGTACTGAGTA17820.1328128144242766No Hit
GTAGTAACAAGAGCTATGTTTAGGTCTCTCTCTCCTTGACACCTGACACA16530.12319841876730032No Hit
ATCCTGATAAGCAAAATACGGAAAGCTAGTGTGGTTGCGCTCAGCCCTGA13520.10076482890102241No Hit
GAGTAAACACTGGGAAGAGGCATGCCTGCCTCCCAGACTGGACCTGGGTC13420.10001952691210951No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)