FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n01_Flu09_E02_FluA_Rep1_Plate3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n01_Flu09_E02_FluA_Rep1_Plate3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTATTGTTGTGGCTATTAAATCACATTAATTCCTTGGCGATTACATGA11.36986301369863No Hit
TCAGCACAATGTCTGGTGTGTCTCTTCAGCAGGAAGAGTCCTTCCAGTGT11.36986301369863No Hit
GTGAATAAGAGAGGCTACCTAATAAGAGCTTTGACATTGAACACGATGAC11.36986301369863No Hit
CTATTGTCGAGGCGATGAAATGGAGAGATGATAAAAGAATAGAACACATT11.36986301369863No Hit
CTCCGGCACTCCTTCCGTAGAAGGCCCTCTTTTCAAACCGTATTTAAAGC11.36986301369863No Hit
CCCATACACACAAGCACGCAGGCAGGATTTATGTGCAACTGATCCCCTCA11.36986301369863No Hit
AGCAGGAGATGAGAGAAAATGGGGAGATTTTGGAGAAACCAGTCAGAACT11.36986301369863No Hit
ATTTTAGCATGGAGCTGCCAAGTTTTGGAGTGTCTGGAATAAACGAGTCA11.36986301369863No Hit
CTCCCTAGAAGGTCCGGAGCTGCAGGTGCTGCAGTCAAAGGAATCGGGAC11.36986301369863No Hit
ATATTGTGTAGAATTAGACCTTCGTGGGCTTTGGAGCTGTGTTTGACTCC11.36986301369863No Hit
CTGCAAATGGACACACCAACGGTAGAACTGGCTTGGGCCCTCCAGAGACA11.36986301369863No Hit
ACCTTTGCCAGCTACCTGGGGGAGGGCTTGCCACTGGAAAACCTTTCAGG11.36986301369863No Hit
CTTCAGACCCAATGTACCATGGGTCATGGCCGAGAGGGCGTGATTCGCAG11.36986301369863No Hit
GTACGTGATAGGACCCCTTATCGGACTCTATTGATGAATGAGTTGGGTGT11.36986301369863No Hit
AGAGAGGGATGTATGGGCTCCAATACAAGTTCCCCAGATGTATTTTTTAA11.36986301369863No Hit
GGTTTGATCAATGGTATACACACCATCTCCTCAACTATGATTCACTCTAT11.36986301369863No Hit
GATATTGAGAGGATCAGTTGCTCACAAATCCTGCCTACCTGCCTGTGCGT11.36986301369863No Hit
GTTAGGATCCAAACAATGGCTACTGCTGGAGCTGTCGTTTTTTCTGGGTG11.36986301369863No Hit
GGTATAAGCTAACAGCTGAGATTGAACCAATAAGAAATTCTCATTAAATA11.36986301369863No Hit
CCCAGTGAGCCTCTGCCCTTAACATGACTGTAGCCATGTTTATTGCATCT11.36986301369863No Hit
CTCTAGTGCCAAGAGCAGTACCTGCTATCTAGTAAGTGCTCGACAAACAC11.36986301369863No Hit
GTGAAACCCCATCTCTACTAAAAATAGAAAAATTAGCTGAGCACAGTGGC11.36986301369863No Hit
GTTGTTTAGTGAGTCATTGGGAAAGAATAAAGACTGCAAGTGGGTTGTGA11.36986301369863No Hit
TTTATACCCCATTTGGAGACATAATTAGAGCAGGTATTTATTAATCATCT11.36986301369863No Hit
GGGGAGGGCCAGAGGCAGAGAGGAGACAGCAGCTAGAGCACCCGTCCTAA11.36986301369863No Hit
AGTCGTACCCACTGGATACTGCAGGTCCATACGCACAGGCAGGTAGGCAG11.36986301369863No Hit
ATATTCAGCTACAACCAAGACTACTCGTTAAGTAATGAATCCTCATTGGA11.36986301369863No Hit
GACTCCAAAACAATGTCAAGCTTTCAGTTATACTTTTTCCTTTGGAATAT11.36986301369863No Hit
CCCAGATACACGTCCACTGTCTGTCCTGGCATGGCCCACACTTGCCTTGG11.36986301369863No Hit
GGCTGAGGTCCTGGATCCTGTCTCTAGTCAGGGATGTGGAGCAGTCCATA11.36986301369863No Hit
CCAGAGAGAAGAGACAGGGCAGCCAGCAGGTGCTGACCGAGGTCAGGGCC11.36986301369863No Hit
TTCCTATACAGTTTAACTGCTTTGTCCATGTTATTTGGGTCTCCATTCCC11.36986301369863No Hit
CAGTTAAACTATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCC11.36986301369863No Hit
GGCGAAGATGCAACAGAACGTCTTACACATAACAAGATATGGCATTACAA11.36986301369863No Hit
CATCAATGTTACAGCCAAACTAGAAGCAGCAGTTGAGTAATAGAGCAGTA11.36986301369863No Hit
GCAGAGGGACCCAGCATTTTCTTTAGATTTCTCTCAAGTGCCAATAGATG11.36986301369863No Hit
CAGCGGCAGATGGGCCACACGAGGTGAGCACTGGCAAGGGGCCTTAGGGT11.36986301369863No Hit
GTTTGAAGGTAGTGAGGAGTGAGTCACAAAGATGGAAGCGGAGGAGAGAA11.36986301369863No Hit
CTCCAGTGCTGGTCTGAGAGATGACCTTCTTGAAAATTTGCAGGCCTACC11.36986301369863No Hit
ATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGGAGCTAATGGA11.36986301369863No Hit
ACACAATATAAGTGAGAAGTCAGGCTTTAAGCCAGGGAGAGCCCTGCCCA11.36986301369863No Hit
CTTCTGGTACATCTGTTCATAATAAAAAATTCCCCATTGGCTTGTGTTTA11.36986301369863No Hit
GAGAGGAGACAGCAGCTAGAGCACCCGTCCTAATAACAAGGGACCAATAC11.36986301369863No Hit
TCAGGCTATCTGCCCGCCTCGGCCTCCCAAAGTACTGGGATTACAGGCGT11.36986301369863No Hit
GAGTTATAGCATCATCGTCAGGCCTCTGGGGCCTCTGCTTAGAGGAGCAG11.36986301369863No Hit
GCCCACGAAGGCCTAATTCTACACGATATAAGTGAGAAGTCAGGCTTTAA11.36986301369863No Hit
CAACAAATGGAGACTGATTGTGAGAGCAATGATCCCAAAGAAATCAAACC11.36986301369863No Hit
GGAAGAATCACAGTATCTACCAAAAGAAGCCAACAAGCTGTAATCCCAAA11.36986301369863No Hit
GCTATCATCTCCTCCACTCGACTTCACACTCCTATGTATTTTTTCTTGGG11.36986301369863No Hit
CCGATAGGGTGCTAAATGAAAAGCGAGATAGTTTCGACAAGCTTTATGGT11.36986301369863No Hit
GTATAACGGGGGATGATAAAAATGCAACTGCTAGCTTCATTTACAATGGG11.36986301369863No Hit
TAGGTCAGGCCACCTGCCTTCCAGGCCCAGCTCTCCAACCTGTCAGGCTC11.36986301369863No Hit
GAGTGGGATCAGCCACCTGCCATTACTCCACAATGATGTTTCTTTCTGCC11.36986301369863No Hit
GATTTCTGGTGATATATGTAATCATCGCCAGGAACATTCGAGGATTTTGG11.36986301369863No Hit
CTTTTCCACCTCTCTCCCATTCATCATGTTCCATAGAGCTCAGCTCTGTG11.36986301369863No Hit
TCCTTACAGCTATCATCTCCTCCACTCGACTTCACACTCCTATGTATTTT11.36986301369863No Hit
CTCAAATGAAGAGAAGGTAACAGAACCCCACGCCCAGAAACCTACTCAGT11.36986301369863No Hit
CTCCCAGAGCTCCAGACAGGAATCCACACCTGACCACTGACTCCACTCCC11.36986301369863No Hit
GCAATAAACATGGCTACAGTCATGTTAAGGGCAGAGGCTCACTGGGGTAA11.36986301369863No Hit
GGCTTGGAGTGCAGTGGCATGATCTCAGCTAACTGCAACCTCTGCCTCCT11.36986301369863No Hit
ATGCATAACTGATATACAGAAACCAGTAATTCGTACATCATTCTGCAATT11.36986301369863No Hit
CGCCTGTAATCCCAACACGTTGGGAGGCTGAGGTGGGAGGATTGCTTGAG11.36986301369863No Hit
GAGCAGAGCCTATGGAAAGAGTGTGACCTTTCACAAGAGCTGACCTGAGC11.36986301369863No Hit
GTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAG11.36986301369863No Hit
TAACATGACTGTAGCCACGTTTATTGCATCTTATGCAGGGTCCAGGGTCT11.36986301369863No Hit
AGTCTTTTCCTTGAATATTGATATACAAAACTGTAAACTAGCAATATCAT11.36986301369863No Hit
GGCCTCAGATCCCTCGGGAATGAAGGGTTGAAATATGACCCCAAGTAAAG11.36986301369863No Hit
GCATCTTTGTTGTTCATGTCCCTTAATACTATTTCAGTTGGGCCATCAAC11.36986301369863No Hit
CTACATGATCTTCTCAATAGACATAGAAAAGGCTTTTTACAAAATTCAAC11.36986301369863No Hit
GGCCCATGGAGCTCAAGGGAGAGAGGAAATTGGAACACCAGGTTTCTTAG11.36986301369863No Hit
AACATCAGCGTTTCTGACTGAAGCTCCTGCAGAGCTGGCTGGGACTGCAG11.36986301369863No Hit
TCCCACCTGCAGTCTGGATTCTGTCCCAATCACACACTAAAGAAGAGACC11.36986301369863No Hit
TTGCATCATTCAAATTGGAATGCCAAATCATTATGTGAGTTAGACCAGAT11.36986301369863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)