FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n01_Flu09_E01_FluA_Rep1_Plate3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n01_Flu09_E01_FluA_Rep1_Plate3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTAAAAAGTCTAAAGACGAAATACAAAAAAATACGATCTAGAAACAA14.0No Hit
GGTTCATTAGCGAACAATATTTCAATAATCAGATAACTTAAATCATCATG14.0No Hit
GTCTTGGTGTTGTCTTCAGAAAAGGTTCAATTTGGGCATTCACTTCTTTG14.0No Hit
CAGTAGAGCCGAGTTATGATAATGGGGCGGGGCCTCTGGTTAATTCTCCC14.0No Hit
CTTCATGGAAGCTCACACATTTTCTCATTTTTCTCTCAGCTAGAATCAGG14.0No Hit
CAAGGGACCAATACATGGGTACCACACTGGGTGCTGAGACTTGGCCTTCT14.0No Hit
CAAATGTACACTCCAGGTGGAGGAGTGAGGAATGACGATATTTAACAAAG14.0No Hit
GGATTCTCGTTAGGTCTGATTAAGCTGTATATTTGGCTATTTTGAAGTAG14.0No Hit
CCTTAGTATCAGTCACACCTAAGAAATTGAAATGGGAGGACCTAAGGCCA14.0No Hit
CAATAGGTCGTTCACCTGAGAACACTTGGCTGCACCTTATTAGGCCAGAT14.0No Hit
GTTTTAAGCAGGATAATTATCTGATCCCACTTGACATACTCAGAGCCTTT14.0No Hit
GTTTGGATCCTAACAATGAAGAAGGTGGTCATGGAGTGAAAGGCTGGGCC14.0No Hit
CCTTTGGGACAGCCCAAGCCATTGTTGCGAAAAATCCGCTTTTACTGGTA14.0No Hit
GGACATAATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAT14.0No Hit
GGCAGAGAATGGATTTCCAAGACTCCAAGCTCCCAGCAAGAGCAACAGTC14.0No Hit
GCAGAGAGGAGACAGCAGCTAGAGCACCCGACCTAATAACAAGGGAGCAA14.0No Hit
ATATAGTAGATGCTCATTTATGTCATTGATAAATGGTCAACAACTCCCCA14.0No Hit
CTTCTGGAGGGTCTCGCCACGAGAAACAGAAGCAGGAGCAGATGGGTAGT14.0No Hit
CCTGTCCACATAAAGTGTACCCATCAGGAGGCATTTCTCCCATATGACAT14.0No Hit
GAATCAGGCCCTTCTTTTTTGTTGCTGTTGTTCCCATTCCTGATAGGGGC14.0No Hit
CACAAATCCAGACGAGAAGATCATTCGAGATAAAGAAGCTGTGGGATCAA14.0No Hit
GTTGTCAAACAAAATCGAAATAGAAACATTTCACTCCTTAGACCACAAAG14.0No Hit
TCATAAGAGTAAAATATCCACAGATGCAATTGAGGGGACAGTATTTGCGC14.0No Hit
GGGTTCAACCGCTGATTTGCTCTGTTGACAAAATTCAGGTCACCTCTAAC14.0No Hit
ATACCGAGGTGATGGGATGATCTGTGCAGCAAACCGCCATGGCACATGTT14.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)