FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n01_Flu09_C06_FluB_Rep1_Plate4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n01_Flu09_C06_FluB_Rep1_Plate4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1397896
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATACCATAAACCATAGAGCAATGGTTAAAACTCAAAACCAAATGAAGC28090.20094484854381156No Hit
AGCACGCACTTGAGGGGAAAGCAAAAGGAGCAAGGAGGCGGTGGAGGCAG18660.1334863251629592No Hit
AGCACGCACTTACCAGGTGGTGATGGAGCTAATGGGAGCCAGGTCAAATG17740.1269050058087297No Hit
GATATACCATAAACCATAGAGCAATGGTTAAAACTCAAAACCAAATGAAG16130.11538769693882807No Hit
ATATAGTACCAAGTGGGGATGGTGTTAAAACATGAGAAACCGGCTCCATG15840.11331315062064704No Hit
CAGACACCTGGGTCTCTGCTACCAACAATACGAGCTAATGTATAATGATT15470.11066631566296777No Hit
AGCACGCACTTCTTATGTGACTGGAGCAGGAGGAAGAGAGAGGGGGAGGT14420.10315502726955367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)