FastQCFastQC Report
Thu 21 Apr 2022
HK3GMBGXL_n01_Flu09_A01_FluB_Rep1_Plate4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3GMBGXL_n01_Flu09_A01_FluB_Rep1_Plate4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1305997
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTCCCACAATAGCCACTTCATAATCAGAACAAACATGTGATTGAGTG30140.23078154084580593No Hit
GTAGTAACAAGAGCTATGTTTAGGTCTCTCTCTCCTTGACACCTGACACA27340.2093419816431431No Hit
CCTTCCCACAATAGCCACTTCATAATCAGAACAAACATGTGATTGAGTGG17870.13683032962556577No Hit
CACGAGCATAGAGGACCATTTCCAATCTCTCATTCCTTATCTTTTCATAG17240.13200642880496663No Hit
CACGTGCATAGAGGACCATTTCCAATCTCTCATTCCTTATCTTTTCATAG17010.13024532215617646No Hit
CAACAGCATAGAGGACCATTTCCAATCTCTCATTCCTTATCTTTTCATAG13940.10673837688754263No Hit
GTAGTAACAAGAGCTCTCGAGATTGGGAATAGGTAATAAAGAAAATGAAT13570.10390529227861933No Hit
ATATACCATAAACCATAGAGCAATGGTTAAAACTCAAAACCAAATGAAGC13280.10168476650405782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)