FastQCFastQC Report
Wed 5 May 2021
HK3CVBGXH_n02_S7_R2_A07_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHK3CVBGXH_n02_S7_R2_A07_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1600971
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAAAAGATCAAATG23120.14441235974917724No Hit
GTATATACATACATATATACTTACACAGTTTGAGCATTCACAGGCCACTA20460.12779744292682377No Hit
ATGTAATACCTATCAAAATACCAATAACACTTCTCACAGAACTAGAACAA18810.11749119752949928No Hit
CATATATACTTACACAGTTTGAGCATTCACAGGCCACTAGAAGCCCATCT17700.11055790517129917No Hit
GTATTAAAGTACATGTAACAGAATTTGCCAGTGTAATCATCTTTAAGTGT16460.10281260559997653No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)