Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HJWCLAFXY_n01_168_T2_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 12762980.0 pass warn fail 44.0 23.9674632752 HJWCLAFXY_n01_168_T2_rep1.fastq.gz pass pass HJWCLAFXY_n01_168_T2_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9815919.0 pass fail warn 45.0 27.2406361709 HJWCLAFXY_n01_168_T2_rep2.fastq.gz pass pass HJWCLAFXY_n01_168_T3_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9584352.0 pass fail warn 45.0 26.7975691558 HJWCLAFXY_n01_168_T3_rep1.fastq.gz pass pass HJWCLAFXY_n01_168_T3_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 11088101.0 pass fail warn 46.0 23.962677739 HJWCLAFXY_n01_168_T3_rep2.fastq.gz pass pass HJWCLAFXY_n01_168_T4_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 7980793.0 pass fail warn 46.0 30.408719141 HJWCLAFXY_n01_168_T4_rep1.fastq.gz pass pass HJWCLAFXY_n01_168_T4_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9680287.0 pass fail warn 45.0 26.9422250131 HJWCLAFXY_n01_168_T4_rep2.fastq.gz pass pass HJWCLAFXY_n01_168_T5_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8526599.0 pass fail warn 45.0 30.0342508169 HJWCLAFXY_n01_168_T5_rep1.fastq.gz pass pass HJWCLAFXY_n01_168_T5_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8951891.0 pass fail warn 45.0 29.8292063913 HJWCLAFXY_n01_168_T5_rep2.fastq.gz pass pass HJWCLAFXY_n01_undetermined pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 10727854.0 pass pass fail 46.0 31.858859388 HJWCLAFXY_n01_undetermined.fastq.gz pass pass HJWCLAFXY_n01_ydcC_2_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 6631372.0 pass fail warn 45.0 31.1825186265 HJWCLAFXY_n01_ydcC_2_rep1.fastq.gz pass pass HJWCLAFXY_n01_ydcC_2_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 8927854.0 pass fail warn 45.0 28.6588419502 HJWCLAFXY_n01_ydcC_2_rep2.fastq.gz pass pass HJWCLAFXY_n01_ydcC_3_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9551760.0 pass fail warn 45.0 28.0334667814 HJWCLAFXY_n01_ydcC_3_rep1.fastq.gz pass pass HJWCLAFXY_n01_ydcC_3_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 11071571.0 pass fail warn 45.0 25.308944827 HJWCLAFXY_n01_ydcC_3_rep2.fastq.gz pass pass HJWCLAFXY_n01_ydcC_4_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 8638000.0 pass fail warn 48.0 34.5483320458 HJWCLAFXY_n01_ydcC_4_rep1.fastq.gz pass pass HJWCLAFXY_n01_ydcC_4_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 12695846.0 pass fail warn 45.0 25.5290890821 HJWCLAFXY_n01_ydcC_4_rep2.fastq.gz pass pass HJWCLAFXY_n01_ydcC_5_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8719002.0 pass fail warn 45.0 28.2525233196 HJWCLAFXY_n01_ydcC_5_rep1.fastq.gz pass pass HJWCLAFXY_n01_ydcC_5_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 11706053.0 pass fail warn 49.0 21.1068466729 HJWCLAFXY_n01_ydcC_5_rep2.fastq.gz pass pass HJWCLAFXY_n02_168_T2_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 12762980.0 pass fail fail 48.0 36.0563659994 HJWCLAFXY_n02_168_T2_rep1.fastq.gz pass pass HJWCLAFXY_n02_168_T2_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9815919.0 pass fail warn 45.0 30.636314828 HJWCLAFXY_n02_168_T2_rep2.fastq.gz pass pass HJWCLAFXY_n02_168_T3_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 9584352.0 pass fail warn 45.0 30.4612282206 HJWCLAFXY_n02_168_T3_rep1.fastq.gz pass pass HJWCLAFXY_n02_168_T3_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 11088101.0 pass fail warn 46.0 26.3636308499 HJWCLAFXY_n02_168_T3_rep2.fastq.gz pass pass HJWCLAFXY_n02_168_T4_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 7980793.0 pass fail warn 46.0 33.0873715006 HJWCLAFXY_n02_168_T4_rep1.fastq.gz pass pass HJWCLAFXY_n02_168_T4_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9680287.0 pass fail warn 46.0 29.4265293674 HJWCLAFXY_n02_168_T4_rep2.fastq.gz pass pass HJWCLAFXY_n02_168_T5_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8526599.0 pass fail warn 45.0 33.2570177429 HJWCLAFXY_n02_168_T5_rep1.fastq.gz pass pass HJWCLAFXY_n02_168_T5_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8951891.0 pass fail warn 45.0 32.1574927418 HJWCLAFXY_n02_168_T5_rep2.fastq.gz pass pass HJWCLAFXY_n02_undetermined pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 10727854.0 pass pass fail 46.0 37.9975829598 HJWCLAFXY_n02_undetermined.fastq.gz pass pass HJWCLAFXY_n02_ydcC_2_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 6631372.0 pass fail warn 45.0 34.9928600475 HJWCLAFXY_n02_ydcC_2_rep1.fastq.gz pass pass HJWCLAFXY_n02_ydcC_2_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 8927854.0 pass fail warn 45.0 31.3771162787 HJWCLAFXY_n02_ydcC_2_rep2.fastq.gz pass pass HJWCLAFXY_n02_ydcC_3_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 9551760.0 pass fail warn 45.0 31.6209602112 HJWCLAFXY_n02_ydcC_3_rep1.fastq.gz pass pass HJWCLAFXY_n02_ydcC_3_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 11071571.0 pass fail warn 45.0 28.4500841707 HJWCLAFXY_n02_ydcC_3_rep2.fastq.gz pass pass HJWCLAFXY_n02_ydcC_4_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 8638000.0 pass fail pass 48.0 37.3834455579 HJWCLAFXY_n02_ydcC_4_rep1.fastq.gz pass pass HJWCLAFXY_n02_ydcC_4_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 12695846.0 pass fail warn 45.0 28.8048806164 HJWCLAFXY_n02_ydcC_4_rep2.fastq.gz pass pass HJWCLAFXY_n02_ydcC_5_rep1 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8719002.0 pass fail warn 45.0 31.2141284778 HJWCLAFXY_n02_ydcC_5_rep1.fastq.gz pass pass HJWCLAFXY_n02_ydcC_5_rep2 pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 11706053.0 pass fail warn 49.0 23.6923674272 HJWCLAFXY_n02_ydcC_5_rep2.fastq.gz pass pass