Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HJWCGAFXY_n01_1215b-2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8224464.0 pass warn warn 36.0 56.3362391683 HJWCGAFXY_n01_1215b-2.fastq.gz pass pass HJWCGAFXY_n01_1409 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 8670045.0 pass fail fail 42.0 59.5387577256 HJWCGAFXY_n01_1409.fastq.gz pass pass HJWCGAFXY_n01_1421 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 8085429.0 pass warn pass 39.0 57.9115718283 HJWCGAFXY_n01_1421.fastq.gz pass pass HJWCGAFXY_n01_1432 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 9939138.0 pass warn fail 41.0 56.0077690073 HJWCGAFXY_n01_1432.fastq.gz pass pass HJWCGAFXY_n01_1434 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 11878980.0 pass warn warn 41.0 50.7063000869 HJWCGAFXY_n01_1434.fastq.gz pass pass HJWCGAFXY_n01_1437 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass warn 10564894.0 pass warn fail 43.0 54.5078348431 HJWCGAFXY_n01_1437.fastq.gz pass pass HJWCGAFXY_n01_POLa-00-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 9582921.0 pass warn pass 39.0 58.8062518278 HJWCGAFXY_n01_POLa-00-3.fastq.gz pass pass HJWCGAFXY_n01_POLa-01-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 14821553.0 pass warn warn 40.0 50.472670008 HJWCGAFXY_n01_POLa-01-3.fastq.gz pass pass HJWCGAFXY_n01_POLa-02-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 10779679.0 pass warn pass 40.0 54.9410042836 HJWCGAFXY_n01_POLa-02-3.fastq.gz pass pass HJWCGAFXY_n01_POLa-03-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 10248494.0 pass warn warn 40.0 55.6159604923 HJWCGAFXY_n01_POLa-03-3.fastq.gz pass pass HJWCGAFXY_n01_POLa-04-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 7169981.0 pass warn pass 41.0 60.1605250209 HJWCGAFXY_n01_POLa-04-3.fastq.gz pass pass HJWCGAFXY_n01_POLa-05-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 12157193.0 pass warn pass 40.0 52.5926637507 HJWCGAFXY_n01_POLa-05-3.fastq.gz pass pass HJWCGAFXY_n01_POLa-5-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass pass 10801248.0 pass warn warn 40.0 53.9135881701 HJWCGAFXY_n01_POLa-5-3.fastq.gz pass pass HJWCGAFXY_n01_undetermined warn 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 8835080.0 pass pass warn 43.0 28.340749456 HJWCGAFXY_n01_undetermined.fastq.gz pass pass HJWCGAFXY_n02_1215b-2 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 8224464.0 pass fail fail 37.0 62.2974703406 HJWCGAFXY_n02_1215b-2.fastq.gz pass pass HJWCGAFXY_n02_1409 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 8670045.0 pass fail fail 41.0 58.5911098056 HJWCGAFXY_n02_1409.fastq.gz pass pass HJWCGAFXY_n02_1421 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 8085429.0 pass fail fail 39.0 60.6070027607 HJWCGAFXY_n02_1421.fastq.gz pass pass HJWCGAFXY_n02_1432 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 9939138.0 pass fail fail 42.0 59.8396725731 HJWCGAFXY_n02_1432.fastq.gz pass pass HJWCGAFXY_n02_1434 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 11878980.0 pass fail fail 40.0 54.7372409107 HJWCGAFXY_n02_1434.fastq.gz pass pass HJWCGAFXY_n02_1437 fail 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 10564894.0 pass fail fail 42.0 58.19655166 HJWCGAFXY_n02_1437.fastq.gz pass pass HJWCGAFXY_n02_POLa-00-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 9582921.0 pass fail fail 40.0 61.577753498 HJWCGAFXY_n02_POLa-00-3.fastq.gz pass pass HJWCGAFXY_n02_POLa-01-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 14821553.0 pass fail fail 41.0 55.562443181 HJWCGAFXY_n02_POLa-01-3.fastq.gz pass pass HJWCGAFXY_n02_POLa-02-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 10779679.0 pass fail fail 41.0 60.1860487334 HJWCGAFXY_n02_POLa-02-3.fastq.gz pass pass HJWCGAFXY_n02_POLa-03-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 10248494.0 pass fail fail 41.0 59.9077893983 HJWCGAFXY_n02_POLa-03-3.fastq.gz pass pass HJWCGAFXY_n02_POLa-04-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 7169981.0 pass fail fail 41.0 62.8545183132 HJWCGAFXY_n02_POLa-04-3.fastq.gz pass pass HJWCGAFXY_n02_POLa-05-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 12157193.0 pass fail fail 40.0 57.806839433 HJWCGAFXY_n02_POLa-05-3.fastq.gz pass pass HJWCGAFXY_n02_POLa-5-3 pass 0.0 warn 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 10801248.0 pass fail fail 41.0 58.5833218079 HJWCGAFXY_n02_POLa-5-3.fastq.gz pass pass HJWCGAFXY_n02_undetermined pass 0.0 fail 76.0 Sanger / Illumina 1.9 fail pass pass 76.0 Conventional base calls pass fail 8835080.0 pass warn fail 45.0 30.6864668067 HJWCGAFXY_n02_undetermined.fastq.gz pass pass